Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0444 ATGCAGCCATTAGACCAATCTTCAACCCGACCCGTTTATGCGTCTGATTTTTGGAATGAGGTTCTGTTGGGTGTGCTCTTGAAGCCTCTCGACAATGCTGGGAACAAGAATGTGAGGGTCACTGGGGAGCACCGTTCGGCCCTGCTTCAGTGCCAGCATGAGAAAGCAGGTGAGTGGAGGACCCTGCAAATAGGGTCACCCGTGAGGTCGGTGAAGAGGGAGAGCTTCCCATTGGGTCCAACCTCGCATATACTTTCCAAGGCTTCCACTCTTTCTCTGTCTTTATCAGCCTCGAATTCTCTCACCACCACCCTCCTTCTCTCCTCTCCCATATTGCCTCTAATCAACTCTCACATCGAGAATATCTTTATCGCAGAGAGGCAGGTATCCGACATTGTCGAGAAGCTTCGAGGCACACGCAACAATCGTTCTGAAAATCAGAGGGATAAACGGGTCGGGTTGGAAAAGATGGGAATAGTTTTTCTCATCCTGGTATTGGGTATACTTTGGTGGAGAGGCTGCTTAGGACACAAAAGTTCTCTAGCAGATGATCTTAAGGGCTTGGATATGAAAACTGGTTTATTTTCCTTAAGGCAAATTAAATCAGCAACCAACAACTTTGATGCTGCTAACAAGATTGGAGAGGGAGGATTTGGTCCTGTTTATAAGGGTACTATGTCTGATGGAACAATAATTGCGGTTAAACAGCTATCAGCCAAATCTCGGCAAGGGAATCGTGAATTTATAAATGAGATAGGCATGATTTCTGCTTTGCAACACCCATGTCTAGTTAACCTTTATGGTTGTTGTGTGGAAGGAGATCAATTGATGCTTATATACGAGTATATGGAAAACAATAGTCTTGCACGTGCTTTATTTGGCTCAAAAGAATCACAGTTAAAACTTGATTGGCCAACAAGACACAAGATCTGTGTTGGTATTGCTAGAGGTTTGGCTTACCTCCATGAAGAGTCAAAATTAAAGATTGTTCATAGGGACATCAAGGCCACTAATGTGTTACTTGATAGAAGTCTCAACCCCAAGATATCTGATTTTGGTTTGGCCAAGCTCGATGAAGAAGACAATACACACATAAGCACACGAATTGCTGGGACTTATGGATATATGGCTCCGGAATATGCAATGCATGGTTATCTAACTGAAAAAGCAGATGTCTATAGTTTTGGAATTGTTGCCTTGGAAATTGTTAGTGGGAAGAACAACACCTTTCACCGGTCAAAGGATGAGACATTCTATCTTCTTGATTGGGCAAATCTCTTGAAAAAAGAAGGAGAGTTAATGGAGCTAGTAGATCAAAGGTTGGGTTCAAATTTTGACAAAGAGGAGTTGATGGTGGTGATCAATGTGGCTCTCCAGTGCACCAATGTGTCCCCATCACTTAGGCCTGCAATGTCTTTAGTGGTAAGCATGCTTGAAGGCAAAACTATAGTTAAGGAGGTTGTGCCAGAGTCAAGTGAGTTATTGGATGACAAGAGGATGGAGGCAATGAGAAAGTATTATAGGCAGCTAGAAGAAAATAACACAACTGAGATCGAAAAGCAAAGTATATCAGAGGACGGGCCATGGACTGCTTCATCTACCTCAGCAATAGATCTCTATCCTGTAAAGATGGATTCCTCTTACTGGGAGAAAAGAAATTAG 1662 0.4302 MQPLDQSSTRPVYASDFWNEVLLGVLLKPLDNAGNKNVRVTGEHRSALLQCQHEKAGEWRTLQIGSPVRSVKRESFPLGPTSHILSKASTLSLSLSASNSLTTTLLLSSPILPLINSHIENIFIAERQVSDIVEKLRGTRNNRSENQRDKRVGLEKMGIVFLILVLGILWWRGCLGHKSSLADDLKGLDMKTGLFSLRQIKSATNNFDAANKIGEGGFGPVYKGTMSDGTIIAVKQLSAKSRQGNREFINEIGMISALQHPCLVNLYGCCVEGDQLMLIYEYMENNSLARALFGSKESQLKLDWPTRHKICVGIARGLAYLHEESKLKIVHRDIKATNVLLDRSLNPKISDFGLAKLDEEDNTHISTRIAGTYGYMAPEYAMHGYLTEKADVYSFGIVALEIVSGKNNTFHRSKDETFYLLDWANLLKKEGELMELVDQRLGSNFDKEELMVVINVALQCTNVSPSLRPAMSLVVSMLEGKTIVKEVVPESSELLDDKRMEAMRKYYRQLEENNTTEIEKQSISEDGPWTASSTSAIDLYPVKMDSSYWEKRN 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0444 553 ProSitePatterns Serine/Threonine protein kinases active-site signature. 329 341 IPR008271 GO:0004672|GO:0006468
Bisa12g0444 553 SUPERFAMILY Protein kinase-like (PK-like) 190 484 IPR011009 -
Bisa12g0444 553 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 176 282 - -
Bisa12g0444 553 FunFam Putative LRR receptor-like serine/threonine-protein kinase 283 490 - -
Bisa12g0444 553 Gene3D Phosphorylase Kinase; domain 1 177 282 - -
Bisa12g0444 553 Pfam Protein tyrosine and serine/threonine kinase 210 477 IPR001245 GO:0004672|GO:0006468
Bisa12g0444 553 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 158 509 - -
Bisa12g0444 553 ProSiteProfiles Protein kinase domain profile. 207 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0444 553 Gene3D Transferase(Phosphotransferase) domain 1 283 494 - -
Bisa12g0444 553 SMART serkin_6 207 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0444 553 CDD STKc_IRAK 213 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0444 Bisa-ChrBisa12 6320683 6332668 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0444 157 518 Receptor kinase-like Gene Family AT1G53420 65.847 9.37e-170 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bisa12g0444 PK_Tyr_Ser-Thr 2.3e-49 CL0016