Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0441 ATGTATGTCTGTACCCTTCTTGGAAACCGGCTAACTGGTCCAATTCCAGCGGAGCTAGGAAATCTCACCAGTCTCAGAAGTTTGGTTTTGGAGTTCAATCAATTGTCTGGAGATCTACCCCCGGAGCTTGGGAATCTTGGCCAGCTTCAAAGACTGTTTCTTACATCCAACAATTTTACTGGGGAATTACCTGCAACATTTGCAAGGCTCACTGAATTGATAGACTTGAATAGTTTTTGTCATCCTGATCTTAAGGGCTTGGATTTGAAATCTGGTTTATTTTCCTTAAGGAAAATCAAAGCAGCAACCAACAACTTTGATGCTGCTAACAAGATTGGAGAGGGAGGATTTGGTCCTGTTTATAAGGGTATTCTGTCTGATGGAACAGTAATTGCGGTTAAGCAATTATCTGCCAAATCTCGGCAAGGGAATCGAGATCAGTTGATGCTTATATATGAATATATGGAAAACAATAGTCTTGCACGTGCTTTATTTGCTGAGGAGGTTGTGCCAGAGTCAAGTGAGGTTTTGGATGAGAAGAGGATGGAGGCAATGAGGAAGTATTATAGGCAGCTGGAAGAAAATAACAAAACTGAGATCCAAAAGCAAAGTATATCAGAGGACGGGCCATGGACTGCTTCATCTACCTCAGCAATTACAGATAGAGCAGGAAATACAACTTTGCAAGCTTTGAAGGAGATAGGAGAGACGCTGGGGAAGAAGGACTGGGACTTCAACGGAAAGAGGGTGCAGGAGAATTTTAATATTGCAGAAGAAGCAGGAGGAGTTGGTAAGGCAATTTCAAAACCATTCACTGCTGTTGTCACAAGTAACACCTTGGAGATCCGTTTATATTGGGCTGCGAAAGGAACAACTTCTATCCCATTTAAATCAGTATATGGTCCCCTTATATCAGCAATATCTGTGGATTCTGATTTTACGCCCCACTTGGAAAATGGGAGTAGCATATCTGCAGGGGCTGTTGTTGGAATTGTGGCTGCAGGAACAGTTATTGTCATCCTGGTAATTGGTGTGCTTTGGCAGAGAGGCTGCATAGGAGATAGAAGTTCACTAGTGAAAGATCTTAAGGGCTTGGATCTGAAAACTAGCCAAGAAGAATCCAGGTTAAAACTGGATTGGCCAACAAGACACAAGATCTGTGTTGGTATTGCTAGAGGTTTGGCTTACCTACATGAAGAGTCAAGACTGAAGATCGTTCATAGGGACATCAAGGCCACTAATGTGTTGCTTGATAAAAGTCTCAACCCCAAGATATCTGATTTTGGTTTGGCCAAGCTCGATGATGAGGACAATACACACATAAGCACTCGAATTGCTGGGACTTATGGATATATGGCTCCTGAATATGCAATGCATGGTTATCTGACTGAAAAAGCAGATGTCTATAGTTTTGGAATTGTTGCTTTGGAAATTGTTAGCGGCAAGACCAACACCATTCACCGGCCAAAGGACGAAGCATTCTATCTTCTTGATTGGGCACATCTCTTGAAAGAAAAAGGAGAATTAATGGAGCTAGTTGATGAAAGAACTGTGGTTGAGGAGGTTATTTCAGAGTCAAGTGAAGTATTGGATGAACAGAGGTTGGAAGCAATGCGGAAATACTACAAGCAGAAGGAATTAAATAAGATTACTGAGATCCCACTGCAAAACATATTGGAAGAAGAGCCATGGACTGCTTCATCTACATCAGCACGTGATCTGTATCCTGTAAACCCTGATTCCTCTTACTGGGAGAAAAGAGATTAG 1767 0.4199 MYVCTLLGNRLTGPIPAELGNLTSLRSLVLEFNQLSGDLPPELGNLGQLQRLFLTSNNFTGELPATFARLTELIDLNSFCHPDLKGLDLKSGLFSLRKIKAATNNFDAANKIGEGGFGPVYKGILSDGTVIAVKQLSAKSRQGNRDQLMLIYEYMENNSLARALFAEEVVPESSEVLDEKRMEAMRKYYRQLEENNKTEIQKQSISEDGPWTASSTSAITDRAGNTTLQALKEIGETLGKKDWDFNGKRVQENFNIAEEAGGVGKAISKPFTAVVTSNTLEIRLYWAAKGTTSIPFKSVYGPLISAISVDSDFTPHLENGSSISAGAVVGIVAAGTVIVILVIGVLWQRGCIGDRSSLVKDLKGLDLKTSQEESRLKLDWPTRHKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKSLNPKISDFGLAKLDDEDNTHISTRIAGTYGYMAPEYAMHGYLTEKADVYSFGIVALEIVSGKTNTIHRPKDEAFYLLDWAHLLKEKGELMELVDERTVVEEVISESSEVLDEQRLEAMRKYYKQKELNKITEIPLQNILEEEPWTASSTSARDLYPVNPDSSYWEKRD 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0441 588 SUPERFAMILY L domain-like 6 98 - -
Bisa12g0441 588 Gene3D - 242 312 - -
Bisa12g0441 588 Gene3D Phosphorylase Kinase; domain 1 85 159 - -
Bisa12g0441 588 SMART serkin_6 106 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0441 588 SUPERFAMILY Protein kinase-like (PK-like) 103 500 IPR011009 -
Bisa12g0441 588 Coils Coil 182 202 - -
Bisa12g0441 588 ProSiteProfiles Protein kinase domain profile. 106 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0441 588 Gene3D Transferase(Phosphotransferase) domain 1 364 561 - -
Bisa12g0441 588 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 358 542 - -
Bisa12g0441 588 FunFam Leucine-rich repeat receptor protein kinase EMS1 1 86 - -
Bisa12g0441 588 Pfam Malectin domain 245 307 IPR021720 -
Bisa12g0441 588 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 4 77 - -
Bisa12g0441 588 Pfam Protein tyrosine and serine/threonine kinase 109 492 IPR001245 GO:0004672|GO:0006468
Bisa12g0441 588 Gene3D Ribonuclease Inhibitor 2 79 IPR032675 -
Bisa12g0441 588 ProSitePatterns Serine/Threonine protein kinases active-site signature. 405 417 IPR008271 GO:0004672|GO:0006468
Bisa12g0441 588 MobiDBLite consensus disorder prediction 565 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0441 Bisa-ChrBisa12 6210885 6231509 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0441 6 76 Receptor kinase-like Gene Family AT1G53420 69.014 1.59e-23 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bisa12g0441 PK_Tyr_Ser-Thr 1.3e-29 CL0016