Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0432 ATGAAGATTCAGTGCAACGTGTGTGAGGCGGCGGAGGCCAAGGTTTTGTGCTGTGCGGACGAGGCGGCGCTGTGTTGGGAATGTGACGACAAGGTTCATGCAGCCAACAAGCTCGCCGGCAAGCACCAGAGAGTCCCTCTCTCTTCCTCTGACATGCCCAAATGTGATATTTGTCAGGAAATATCTGGGTTTTTCTTCTGTTTGGAGGACCGGGCTTTACTCTGCCGAACCTGTGACGTGGCAATACACACAGCAAATTCCTATGTCTCCAATCATCAAAGGTTTCTGCTCACTGGCGTAAGAGTAGGCCTTGAAGCCACTGAGCCTGGTGCTTCCTCATCTTCTGTTAAGTCACAATCTGAGGAGAAAATGTCTGATACGAAATCTTCTTCCGCATCCAGAAAGGTCTCTTCGATACCTGAATCATCAGAATACGTCCAAGGTGGAGAAGCTGGGGAGTTCCTGCCTGCTAAGGTGTCTTATGGTGGTGGTTCTTCTGCTGGGAACATCTCAAACTGGGCCATTGATGAATTTCTCGGTTTAAATGAATTCAGTCAGAATTATAATTACATGGACAATGGACCATCCAAGGCTGACAGTGGTAAGCTTGGGGATTCAGACTATTCTAGTTTAAAATCTAGTGAAGAGGAAATCAATGACAATGATGACTGCTTGGGGCAGGTTCCGGATTCATCCTGGATGGTTCCTCAGATCCCTTCCCCTCCTACAGCTTCAGGGTTACATTGGCCAAAAAACCCTCAATTTTCATCTGACAGTGCCACGTTAGCTCCTGTTCCTCACATATGCTTTTCTGACACACAGCACGCTAAGCATGTTCATTATACCCGTATTACATTGAAGCAATGGAGACAACCATAA 879 0.4699 MKIQCNVCEAAEAKVLCCADEAALCWECDDKVHAANKLAGKHQRVPLSSSDMPKCDICQEISGFFFCLEDRALLCRTCDVAIHTANSYVSNHQRFLLTGVRVGLEATEPGASSSSVKSQSEEKMSDTKSSSASRKVSSIPESSEYVQGGEAGEFLPAKVSYGGGSSAGNISNWAIDEFLGLNEFSQNYNYMDNGPSKADSGKLGDSDYSSLKSSEEEINDNDDCLGQVPDSSWMVPQIPSPPTASGLHWPKNPQFSSDSATLAPVPHICFSDTQHAKHVHYTRITLKQWRQP 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0432 292 MobiDBLite consensus disorder prediction 130 144 - -
Bisa12g0432 292 CDD Bbox1_BBX-like 5 47 - -
Bisa12g0432 292 SMART bboxneu5 4 47 IPR000315 GO:0008270
Bisa12g0432 292 SMART bboxneu5 50 97 IPR000315 GO:0008270
Bisa12g0432 292 FunFam B-box zinc finger protein 22 1 91 - -
Bisa12g0432 292 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 259 - -
Bisa12g0432 292 MobiDBLite consensus disorder prediction 195 252 - -
Bisa12g0432 292 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Bisa12g0432 292 ProSiteProfiles Zinc finger B-box type profile. 50 97 IPR000315 GO:0008270
Bisa12g0432 292 Pfam B-box zinc finger 51 93 IPR000315 GO:0008270
Bisa12g0432 292 Pfam B-box zinc finger 4 47 IPR000315 GO:0008270
Bisa12g0432 292 MobiDBLite consensus disorder prediction 108 144 - -
Bisa12g0432 292 CDD Bbox1_BBX-like 54 97 - -
Bisa12g0432 292 Gene3D Classic Zinc Finger 1 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0432 Bisa-ChrBisa12 6142843 6145535 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0432 1 252 C2C2-CO-like Transcription Factor Family AT1G78600 50.340 6.52e-89 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Bisa12g0432 zf-B_box 3.2e-06 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g0432 12 6142843 6145535 Bisa12g0432 12 6142843 6145535 ECH