Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0427 ATGCCTGGGAATAAGTGTAACGGTAATTCTAATCATATTTCTCCAAGTCGTGTTGAACGACTTTTAAGAGACAGAGAGCTAAGAAGAAGCGGCAGAACTTCTCATTTGAATGAGTCAACTGATAATAATAATAATAATAGGGTTACTGAACCTTTTGAGCATGACCAGCGTTTGAGAGAAGATAATAACTCAGGTGCTTCCCGTGTTGAACAATTCCTGGAAGGGGGGCCAAGGGCGCTTAGGGAGGGATGTGAAAAACAGAATGGGAGGCATTTTAGACAACGACTTTTGGTGGTGGCCAACAGGCTGCCGGTCTCAGCAGTTAGGAGAGGCGAAGACTCTTGGTCTCTGGAGATTAGTGCTGGAGGTCTAGTCAGCGCTCTATTAGGTGTGAAGGAGTTTGAGGCAAGGTGGATAGGTTGGGCCGGTGTCAATGTGCCTGATGAGATTGGACAGAAGGCACTCACTAAAGCTTTGGCTGAAAAGAGATGCATTCCAGTATTTCTGGATGAAGAGATTGTTCACCAATATTATAATGGCTACTGCAACAACATCTTGTGGCCCCTTTTTCATTACCTTGGACTACCCCAAGAAGATCGCCTTGCTACCACACGAAGTTTCCAGTCGCAGTTTGAAGCATATAAGGACGCCAATAAAATGTTTGCTGATGTTGTGAACAAACACTATGAAGAGGGTGATGTTGTTTGGTGCCATGATTACCATCTTATGTTCCTTCCAAAATGTTTAAAGGACTATAACAGCAAAATGAAAGTTGGATGGTTTCTTCACACCCCATTTCCATCTTCTGAAATTCATAGGACATTACCATCTCGTTCAGAGCTTCTGCATTCTGTTCTTGCAGCTGATTTAGTTGGTTTTCACACCTATGATTATGCACGGCATTTTGTTAGTGCCTGTACTCGCATTCTTGGACTTGAGGGCACGCCTGAAGGGGTTGAGGATCAAGGGAAGCTAACTCGAGTTGCTGCATTTCCAATTGGGATAGATTCAGATCGATTCAGACGTGCGCTTGAGCTTACTCAAGTCCAGGAACATATCAAAGAGTTACAAGAAAGATTTGAAGGTAGAAAGGTAATGTTAGGCGTTGATCGCCTTGATATGATTAAAGGAATTCCTCAGAAAATTCTAGCATTTGAAAAATTTTTGGAAGAGAATCCTGTTTGGCGTGACAAAGTAGTTTTGCTTCAAATTGCTGTGCCAACTAGAACGGACGTTCCTGAGTATCAAAAGCTTACAAGCCAGGTTCATGAAATTGTTGGTCGCATTAATGGAAGATTTGGATCATTGACTGCTGTTCCTATACATCACCTGGATCGTTCTCTTGACTTTCATAAACTATGCGCTTTATATGCTGTTACTGATGTAACACTGGTCACATCTTTGCGGGATGGGATGAATCTTGTCAGTTATGAATTTGTGGCCTGCCAGGAGAAGAAGAAAGGGGTTCTCATTCTTAGTGAATTTGCTGGTGCTGCACAGTCTCTGGGTGCTGGAGCGATTCTTGTTAACCCCTGGAACATCACAGAAGTTGCTGCTGCAATTGCCCAGGCTCTGAATATGACATCCGAAGAAAGAGAGAAGCGACATAAGCATAACTATGTACATGTAACAACCCACACTGCTCAGGAATGGGCAGAGACTTTTGTAAGCGAACTAAATGATACCGTTGTTGAGGCACAACTAAGGACAAGACAAGTTCCACCACCACTTCCAACCAAGACTACAATTGAACGCTATCTGCAGTCAACTAATCGATTGCTTATTCTGGGATTCAATGCAACATTAACTGAACCAGTTGAAAAAAAAGGTGATCAGATTAAGGAAATGGAGCTCAAGGTACATCCAGAATTAAGACAACCCTTGACAGCACTTTGCAGTGACCCAAAGACCACAATTGTTGTGCTTAGTGGAAGTGGCAGAAATGTCTTACATAATAACTTTAAGGAATACAAGATGTGGTTGGCAGCGGAGAATGGGATGTTTTTACAGCCTGCGTGGGGAGAATGGATGACAACGATGCCGGAGCATCTGAATATGGAATGGGTTGACAGTGTGAAGCATGTTTTTGAGTACTTCACAGAAAGAACACCCCGGTCTCATTTTGATTTTGAAGAAAGAGAAACGTCACTTGTATGGAATTATAAATATGCAGATGTTGAGTTTGGAAGACTACAAGCAAAGGACATGTTGCAGCATCTCTGGACGGGTCCAATTTCTAAGGGTCCAATTTCTAATGCATCAGTTGAAGTTGTTCAAGGTAGCCGATCTGTTGAGGTGCGGGCTGTTGGTGTTACAAAGGGAGCAGCTATTGACCGCATCCTGGGTGAGATAGTTCACAGTAGATCCATGACAGCACCAATCGATTATGTCCTGTGTATAGGACATTTTCTGTCAAAGGATGAGGATGTTTATACCTTCTTCGAGCCGGAGCTTCCTTCTGCGAGTGTGGGTGTTCCACGAAACAAGGTAGCAGAAGGAGTTAAATTCCCTGGTGATCGGAGATCATCTCTGAATATTCCAGCCAGTACTAAAAGTTCACCAAAGTCATCTCCATCTCCAAGCAAGCCACAACGACCTCTGTCAAATTCTGAGAAGAAACCAACTAACCATATCTGTAGTGCACCAAGGCGACCAGCACCTGAGATGATCTCATGGAATGTACTTGACCTCAAGAAGGAGAACTACTTCTCTTGTGCCGTTGGCCGAAATCGAACAAATGCTCGTTATAAGCTTGGATCCTCTGATGACGTTGTTGCATTTCTCAAGGAACTGGCTCAAGCATCTTCCACATACCATTGA 2820 0.4333 MPGNKCNGNSNHISPSRVERLLRDRELRRSGRTSHLNESTDNNNNNRVTEPFEHDQRLREDNNSGASRVEQFLEGGPRALREGCEKQNGRHFRQRLLVVANRLPVSAVRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFEAYKDANKMFADVVNKHYEEGDVVWCHDYHLMFLPKCLKDYNSKMKVGWFLHTPFPSSEIHRTLPSRSELLHSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGKLTRVAAFPIGIDSDRFRRALELTQVQEHIKELQERFEGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPVWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGSLTAVPIHHLDRSLDFHKLCALYAVTDVTLVTSLRDGMNLVSYEFVACQEKKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAAAIAQALNMTSEEREKRHKHNYVHVTTHTAQEWAETFVSELNDTVVEAQLRTRQVPPPLPTKTTIERYLQSTNRLLILGFNATLTEPVEKKGDQIKEMELKVHPELRQPLTALCSDPKTTIVVLSGSGRNVLHNNFKEYKMWLAAENGMFLQPAWGEWMTTMPEHLNMEWVDSVKHVFEYFTERTPRSHFDFEERETSLVWNYKYADVEFGRLQAKDMLQHLWTGPISKGPISNASVEVVQGSRSVEVRAVGVTKGAAIDRILGEIVHSRSMTAPIDYVLCIGHFLSKDEDVYTFFEPELPSASVGVPRNKVAEGVKFPGDRRSSLNIPASTKSSPKSSPSPSKPQRPLSNSEKKPTNHICSAPRRPAPEMISWNVLDLKKENYFSCAVGRNRTNARYKLGSSDDVVAFLKELAQASSTYH 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0427 939 SUPERFAMILY HAD-like 592 785 IPR036412 -
Bisa12g0427 939 CDD GT20_TPS 95 560 IPR001830 GO:0003824|GO:0005992
Bisa12g0427 939 MobiDBLite consensus disorder prediction 833 883 - -
Bisa12g0427 939 MobiDBLite consensus disorder prediction 29 69 - -
Bisa12g0427 939 Gene3D - 682 769 - -
Bisa12g0427 939 Pfam Trehalose-phosphatase 615 821 IPR003337 GO:0003824|GO:0005992
Bisa12g0427 939 Pfam Glycosyltransferase family 20 95 560 IPR001830 GO:0003824|GO:0005992
Bisa12g0427 939 NCBIfam alpha,alpha-trehalose-phosphate synthase (UDP-forming) 95 560 IPR012766 GO:0003825|GO:0005992
Bisa12g0427 939 Gene3D Glycogen Phosphorylase B; 337 544 - -
Bisa12g0427 939 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 87 933 IPR001830 GO:0003824|GO:0005992
Bisa12g0427 939 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like 342 544 - -
Bisa12g0427 939 CDD HAD_TPP 593 831 - -
Bisa12g0427 939 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 682 769 - -
Bisa12g0427 939 Gene3D - 616 801 IPR023214 -
Bisa12g0427 939 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 87 341 - -
Bisa12g0427 939 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 94 563 - -
Bisa12g0427 939 Gene3D Glycogen Phosphorylase B; 83 335 - -
Bisa12g0427 939 MobiDBLite consensus disorder prediction 48 64 - -
Bisa12g0427 939 MobiDBLite consensus disorder prediction 843 876 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0427 Bisa-ChrBisa12 6038771 6054831 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0427 1 937 Trehalose Biosynthesis Gene Families AT1G78580 77.964 0.0 1480
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g0427 12 6038771 6054831 Bisa12g0427 12 6038771 6054831 ECH