Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0418 ATGCAGCAAGATCAGCTTAAGAAGGATGTTAAAGACTTCGACTTTTTTACTGAGTATGGGGATGCAAATAGATACAAGATTCTTGAAGTTATAGGGAAGGGTAGCTATGGGGTAGTTTGTGCAGCAATTGACACGCACTCTGGGGAAAAAGTTGCAATTAAGAAGATTCATGATATTTTTGAGCATATCTCTGATGCCATTAGAATCCTTCGTGAAGTGAAGTTGCTACGGCTTTTAAGACATCCTGATATTGTTGAGATTAAGCGAATCATGTTGCCACCTTCAAAGAGGGAGTTTAAAGATATTTATGTTGTCTTTGAGCTTATGGAATCGGATCTCCATCAGGTCATCAAAGCTAATGATGACTTGACCCGTGAGCATCATCAATTTTTTCTTTATCAGATGCTACGTGCATTGAAGTATATGCATACAGCAAATGTGTATCACAGAGACCTTAAACCCAAGAATATATTGGCAAATGCAAACTGCAAACTCAAAGTTTGTGATTTTGGACTAGCCAGAGTTGCATTCAATGATGCCCCTACAACAATATTTTGGACGGATTATGTTGCTACGAGATGGTACAGAGCCCCGGAGCTGTGTGGATCATTCTTTTCTAAGTATACACCAGCAATTGACATATGGAGCATTGGATGCATATTTGCTGAGGTGCTAACAGGAAAACCATTGTTTCCTGGTAAAAGTGTTGTTCATCAATTAGATTTGATTACTGATCTTCTTGGGACACCGTCACCGGAAACTATAACTGGGGTTCGAAATGAGAAGGCAAGGAAATACTTGATGGAAATGCGGAAAAAACCTCCAGTACCATTTGAACAGAAATTTCCAAACGCTGATCCATCAGCACTTCGTCTATTGCAAAGGCTTCTGGAATTTGATCCTAAGGATCGGCCAACAGCTGAAGAGGCACTGGCTGATCCTTACTTCAAGGGCTTGGCCAAGGTTGAGAGGGAACCGTCGTGTCAGCCAATTTCGAAGTTGGAATTTGAGTTTGAGAGGCGAAGGGTAACAAAGGAGGATGTTAGGGAACTAATATATCGGGAAATACTGGAATATCATCCTCAATTGCTTAAAGATTACATGAATGGAACTGAAAGCACAAACTTCCTCTATCCAAGTGCAATTGGTCAATTCAGAAAGCAATTTGCTTATTTTGAGGAAAATGGTGGTAATAGCGGCCCAGTAATTCCTCCAGAAAGGAAGCATGTCTCCCTTCCAAGGTCCACTGTTCACTCTAGTACAATTCCTCCCTATGCACATTGCGCTACATATGGGAACAAGCAAAACCCATCAGAGGCATCTAGGAATTTGAGAGCTACAGAATCAAACTCTGGAAGTTATTTAAGGAGTTCACGACCTCCACCAAGGGTGCCAACAGCTAAACCAGGCAGAGTAATAGGACCAGTTCTACCCTATGAGAACGGGAGAAACATAAAAAATGCATATGACACAAGAATCATTAGCCGAAATGGTCTTCCACAAGTTGTCCCTCCTCCAGGTTCCTTTAGGGCTCACCCCACAAACCCAGAGAAGACTTTGTCAGAAACATACGAGGATTTGTCACAAGGCAAACATCAGCAAGTCCCATCCCAGCAGCAGAGTAACTTTCCGGCCAGAAAAGCATTTGACCTCAACACCAACCCATACTACCAAGCCAAGGATGGGGCTGTCTCAACCATTGATGCAAAGTTGCTGCAGGCACAGTCGCAATTTGGTGCAGTCGGTGTTGCAGCTGTGGCAGTTGCAGCTCACAGGCATTCTTCTGGGGCTTTTCAGTATGGATTGCCATAG 1812 0.4283 MQQDQLKKDVKDFDFFTEYGDANRYKILEVIGKGSYGVVCAAIDTHSGEKVAIKKIHDIFEHISDAIRILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFNDAPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETITGVRNEKARKYLMEMRKKPPVPFEQKFPNADPSALRLLQRLLEFDPKDRPTAEEALADPYFKGLAKVEREPSCQPISKLEFEFERRRVTKEDVRELIYREILEYHPQLLKDYMNGTESTNFLYPSAIGQFRKQFAYFEENGGNSGPVIPPERKHVSLPRSTVHSSTIPPYAHCATYGNKQNPSEASRNLRATESNSGSYLRSSRPPPRVPTAKPGRVIGPVLPYENGRNIKNAYDTRIISRNGLPQVVPPPGSFRAHPTNPEKTLSETYEDLSQGKHQQVPSQQQSNFPARKAFDLNTNPYYQAKDGAVSTIDAKLLQAQSQFGAVGVAAVAVAAHRHSSGAFQYGLP 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0418 603 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Bisa12g0418 603 MobiDBLite consensus disorder prediction 432 457 - -
Bisa12g0418 603 MobiDBLite consensus disorder prediction 497 517 - -
Bisa12g0418 603 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Bisa12g0418 603 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0418 603 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 24 365 - -
Bisa12g0418 603 FunFam Mitogen-activated protein kinase 14 119 - -
Bisa12g0418 603 MobiDBLite consensus disorder prediction 432 471 - -
Bisa12g0418 603 FunFam Mitogen-activated protein kinase 111 339 - -
Bisa12g0418 603 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0418 603 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0418 603 CDD STKc_TDY_MAPK 24 361 - -
Bisa12g0418 603 SUPERFAMILY Protein kinase-like (PK-like) 21 320 IPR011009 -
Bisa12g0418 603 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Bisa12g0418 603 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0418 Bisa-ChrBisa12 5981490 5986291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0418 1 593 MAP Kinase Gene Family AT1G53510 69.368 0.0 806
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Bisa12g0418 Pkinase 5.5e-66 CL0016