Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0411 ATGAGCAAGTCTCTGGTCTTAGCCTTTTACATCACCATATGCTGTGTCGCTTTTGTCACTTCCAAGATCATCATCTCAATTCTCCTCTACAAAAGGTGGAAAAAAAAGCACTTGATTTATGAAGAAGGTTATCCAGGTGGGAAGATGGTGATATTTAGGTCTTCAGTGCTTCAATCTCTGACATCTGATGTGGTGTTAAAGAAGACATTGAAACTGAGCAGCAAGGACATCATTGGATCTGGTGGGTATGGGACAGTTTATAAACTGAAAATAGATGAATCCACAGCCTTTGCAGTGAAAAGGCTCAACAGAGGAACTGCAGATAGAGAGAGAGGCTTTGAGAGAGAGTTGGAAGCAATGGCAGACATAAAACATCGCAATATTGTCACTCTTCATGGTTATTACACTGCTCCACACTACAACCTTCTCATCTATGAGCTCATGCCTAATGGAAGTTTGGATTCTTTTCTACATGGAAGATCAATGGAGAAGAATGTCTTGGACTGGGCATCCAGATACAGAATAGCCATAGGTGCTGCTAGAGGAATATCATATCTTCACCATGATTGCATCCCTCACATTATCCACAGAGACATCAAGTCAAGCAACATATTGCTGGATCAAAGCATGGAGGCTCGAGTTTCTGATTTTGGATTGGCCACGTTGATGGAACCCAATAAAACTCATGTTACAACCATGGTTGCTGGAACTTTTGGGTACTTAGCCCCTGAGTATTTTGATACAGGAAGAGCAACTGTAAAAGGAGATGTTTATAGCTTTGGAGTTGTGCTACTTGAGCTTTTAACTGGGAAAAAACCCAGTGATGAAGCATTTATAGAAGAAGGAACCAAACTTGTCACATGGGTGAAGGGTGTTGTAGGAGAGAAGAAGGAGGAGTTAGTTCTTGACAACAGCTTAGGGTCATGTCCGAGGCAAGAGGTTAACAACGTTTTCAACACTGCAATGATGTGTCTTGAACCAGATCCTTTGAAGAGGCCGACCATGGCTGAGGTTGTCACCTTGCTCGAGCACACCAAATCCGACAAACTACTGAACTAG 1059 0.424 MSKSLVLAFYITICCVAFVTSKIIISILLYKRWKKKHLIYEEGYPGGKMVIFRSSVLQSLTSDVVLKKTLKLSSKDIIGSGGYGTVYKLKIDESTAFAVKRLNRGTADRERGFERELEAMADIKHRNIVTLHGYYTAPHYNLLIYELMPNGSLDSFLHGRSMEKNVLDWASRYRIAIGAARGISYLHHDCIPHIIHRDIKSSNILLDQSMEARVSDFGLATLMEPNKTHVTTMVAGTFGYLAPEYFDTGRATVKGDVYSFGVVLLELLTGKKPSDEAFIEEGTKLVTWVKGVVGEKKEELVLDNSLGSCPRQEVNNVFNTAMMCLEPDPLKRPTMAEVVTLLEHTKSDKLLN 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0411 352 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 148 351 - -
Bisa12g0411 352 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 11 347 - -
Bisa12g0411 352 FunFam Receptor-like serine/threonine-protein kinase 43 147 - -
Bisa12g0411 352 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Bisa12g0411 352 SMART serkin_6 72 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0411 352 Gene3D Transferase(Phosphotransferase) domain 1 148 351 - -
Bisa12g0411 352 ProSitePatterns Protein kinases ATP-binding region signature. 78 100 IPR017441 GO:0005524
Bisa12g0411 352 Pfam Protein kinase domain 74 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0411 352 ProSiteProfiles Protein kinase domain profile. 72 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0411 352 Gene3D Phosphorylase Kinase; domain 1 48 147 - -
Bisa12g0411 352 SUPERFAMILY Protein kinase-like (PK-like) 55 344 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0411 Bisa-ChrBisa12 5812069 5815731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0411 3 343 Receptor kinase-like Gene Family AT2G35620 46.802 1.97e-100 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Bisa12g0411 Pkinase 6.5e-49 CL0016