Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0397 ATGGATATAACGGAAATTTCAATCTTGCATCATGTGGCCATTGTGCTTCTGGGGCTTTGGTTGCTATCTGCCTACAACTGGTGCCACCCGGTTAATTATTTTATAGCACTGATCTATCTCTATCTGGTTCATGAACGTTATGTTACGAGACTGCGGAGGAAGTTACAGTTTGAGGAGAGGAAACAATCTAATCAAAGAAGGGTGCTTTCTGATTCTGAAACAGTGCGGTGGTTGAACCATGCAGTTGAAAACATATGGCCCATATGTATGGAACAAATTGCCTCTCAGAAGATTTTGCTTCCCATCATACCTTGGTTCTTAGAGAAGTACAAACCTTGGACTGCTAAAAAAGCTGTGGTTCAGCATCTGTACCTGGGAAGAAACCCCCCTTTGTTAACTGAGATAAGGGTGCTCCGCCAAAATAATGATGACCACTTGGTTCTGGAGTTAGGAATGAATTTTCTCACGGCTGATGATATGAGTGCAATACTAGATATACAACTAAGGAAAAGATTAGGCTTTGGGATGTGGGCAAAGCTGCATATTACAGGCATGCATGTTGAAGGGAAGGTTTTGGTTGGGGTAAAATTTGGCCGGACATGGCCTTTCCTTAGTCGTTTGCGGGTATGCTTTGTTGAACCTCCATACTTCCAAATGACTGTCAAGCCTATTTTTCATCGTGGGGTTGATGTGACAGAAATTCCTGGAATTGCTGGATGGCTGGATAAGCTTTTGTCTATTGCATTTGAACAGACTCTTGTTGAGCCTAATATGCTGGTTGTTGATATTGAGAAATTTGCTTCACCACATCCAGAGCCTTGGTTCTCTGTTGATGAGAAGGAGCCTGTTGCTTATGCCCATGTAGAAGTTGTTGAAGCATCTGACATGAAGCCATCAGATCTAAATGGATTAGCAGATCCATATGTAAAAGGTCATTTGGGTGGCTATAGATTCAGGACAAAGATAAATAGGAAAACACTTTCTCCAAAATGGCATGAAGAATTTAAAATTCCCATCATAACATGGGAGTGTAACAATGTGCTGGCTATTGAAGTTCGTGACAAGGACCATTTCTATGATGATAACCTTGGAGACTGTTCTGTGAACATTAATGATTTTAGGGATGGACAGAGACATGATATGTGGCTGCCACTTCAGAACATAAAAACAGGGAGGTTGCACCTGGCAATAACTATTCTTGAAGACAATGTAAAGGCAGTTGATGATACATGTGAGCAGGAAACAGTGGACATTGAAGAAAGAAGGAATTCCTTTACAAATGAGACTTGTGATAAAAATTCTTTCTCATCTGTTTCATCAGAAAAATCTCCAAATGTTTCATCAGAAAAATCTCCAAAAGTGGCGGATAAGTTTGATCCTATAGATATAGAAGGGCAAAAGGAGACTGGAATTTGGGTTCATCAACCAGGTAGCGAAGTTTCCCAAACTTGGGAGCCTAGAAAAGGGAGGAGTCGACGTCCTGATACCGAGATTCACAAGGAGCCTAATGATTTATATGGCAGTTTCAATTCAACAGTGTCTGGATCCTTGAACAATGACAGCAGCAGTCCTGATGATAACCCCGAAGATAAGCATCGGATGAGAGCAGTTAGGAAGGGACTGCACAACATTGGGTCAATATTTCGAAGGAGGAGCTCAAAGAAGGATCCTCTGACATTGACACACAGTGTTGGAGAGACTGTTCCGTCTCCACATGCTAACATTAAGGCAGTCGATGCCAAGGAGATTGGAGTGAAGTTTATTATGGAGGATAACGCTGCAGGGTTTCCCACTGGTAAGGTTCAGAAAGAAGGGACGTCTACTGAAGGCAGTAGTCCAGAAAGCCCGAGCAAGGGAAATGTCAAAGATATGGCAAAGAATATTCTGAAACATGCAGGAAAATCGGCTCATGGCCTAAAGCATGTCCTTTCCAATAAAACAAGGAAAACTGAAGGTGGCACACTGGGAATCCCAGAAAGAGAAAACTTAGAAAATTTTGACTCTTCTGACGACGATTCTCTTTCAGTTCAGTTACCCAGAGATGAAAGAATTCCCGTTGCTTCCAAGGTCATAGTCTCTTTTGACAATGATTCTTTCAATTCCAGTAAGAATGTTGTGGTTCAGACAGCTTCATCAGACACTACTATGAGCAATGAAGGTCCAATGAAGAAGGTTACTGTTGAAGACCCTGCAAACATTGGTAGCCCTGAAAAGTCTTCCAAAGAATCTGTTGAACAAAAGCATGACAAAGATGAAATGGTAGGACAGAAATGA 2274 0.4169 MDITEISILHHVAIVLLGLWLLSAYNWCHPVNYFIALIYLYLVHERYVTRLRRKLQFEERKQSNQRRVLSDSETVRWLNHAVENIWPICMEQIASQKILLPIIPWFLEKYKPWTAKKAVVQHLYLGRNPPLLTEIRVLRQNNDDHLVLELGMNFLTADDMSAILDIQLRKRLGFGMWAKLHITGMHVEGKVLVGVKFGRTWPFLSRLRVCFVEPPYFQMTVKPIFHRGVDVTEIPGIAGWLDKLLSIAFEQTLVEPNMLVVDIEKFASPHPEPWFSVDEKEPVAYAHVEVVEASDMKPSDLNGLADPYVKGHLGGYRFRTKINRKTLSPKWHEEFKIPIITWECNNVLAIEVRDKDHFYDDNLGDCSVNINDFRDGQRHDMWLPLQNIKTGRLHLAITILEDNVKAVDDTCEQETVDIEERRNSFTNETCDKNSFSSVSSEKSPNVSSEKSPKVADKFDPIDIEGQKETGIWVHQPGSEVSQTWEPRKGRSRRPDTEIHKEPNDLYGSFNSTVSGSLNNDSSSPDDNPEDKHRMRAVRKGLHNIGSIFRRRSSKKDPLTLTHSVGETVPSPHANIKAVDAKEIGVKFIMEDNAAGFPTGKVQKEGTSTEGSSPESPSKGNVKDMAKNILKHAGKSAHGLKHVLSNKTRKTEGGTLGIPERENLENFDSSDDDSLSVQLPRDERIPVASKVIVSFDNDSFNSSKNVVVQTASSDTTMSNEGPMKKVTVEDPANIGSPEKSSKESVEQKHDKDEMVGQK 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0397 757 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 71 264 IPR031468 GO:0008289
Bisa12g0397 757 MobiDBLite consensus disorder prediction 485 502 - -
Bisa12g0397 757 ProSiteProfiles C2 domain profile. 269 383 IPR000008 -
Bisa12g0397 757 MobiDBLite consensus disorder prediction 709 757 - -
Bisa12g0397 757 MobiDBLite consensus disorder prediction 601 618 - -
Bisa12g0397 757 CDD C2 287 385 - -
Bisa12g0397 757 MobiDBLite consensus disorder prediction 633 675 - -
Bisa12g0397 757 Gene3D C2 domain 275 401 IPR035892 -
Bisa12g0397 757 MobiDBLite consensus disorder prediction 740 757 - -
Bisa12g0397 757 Pfam C2 domain 287 385 IPR000008 -
Bisa12g0397 757 PANTHER C2 DOMAIN-CONTAINING PROTEIN-LIKE 1 725 - -
Bisa12g0397 757 MobiDBLite consensus disorder prediction 429 450 - -
Bisa12g0397 757 MobiDBLite consensus disorder prediction 505 523 - -
Bisa12g0397 757 MobiDBLite consensus disorder prediction 596 621 - -
Bisa12g0397 757 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 276 400 IPR035892 -
Bisa12g0397 757 MobiDBLite consensus disorder prediction 429 531 - -
Bisa12g0397 757 CDD SMP_SF 95 262 - -
Bisa12g0397 757 SMART C2_3c 285 382 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0397 Bisa-ChrBisa12 5614827 5621475 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0397 278 417 Lipid Metabolism Gene Families AT3G61300 28.276 1.17e-09 60.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g0397 12 5614827 5621475 Bisa12g0397 12 5614827 5621475 ECH