Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bisa12g0386 | ATGGCTGCGGTTGGAGAGATTTTTGGTGATGCAGCAGCTGACAACAAATTGGACTCAAAACCGAAGCCCGAGAACGAAGTCAATGTGCAGAAGCTTTTTGATATGTTCACAAAGTTGAATCCTTTGGCAAAGGAGTTTATCCCGCCATCCTATTCTCATCATGATCATCGTTATCTGAGCTATAATCAGTTATCTCCCAACAATTTTCTGGTCAACAATAAGCCCTCTGATAGTGACAATTACCCAAACAACCGAAGGAGAAGAAATAATTTCAGTCAAGGTAGAAGGCTGAATGGAAAAGTGCACAAAGCTCAGAGAGAAGACAGCATTAGAAGAACTGTATATGTTTCAGATATTGATCAGCATGTTACTGAGGAACGGCTTGCTGCTTTATTTATCAGTTGTGGGCAAGTGATTGATTGTCGAATTTGTGGTGATCCACATTCAATCCTTCGATTTGCATTCGTGGAGTTTTCAGATGAGCGGGGTGCGAGAGCAGCTCTAAACCTTGGTGGCACTGTGCTCGGTTACTATCCAGTTAGGATCCTTCCTTCAAAAACTGCCATCCTTCCTGTGAACCCTACATTCCTGCCTAGGTCAGAAGATGAGCGGGAAATGTGTAGCAGAACTGTCTATTGTACAAATATTGAGAAAAAGGTTTCTCAAGCTGAAGTGAAGAATTTTTTTGAAACAGCTTGTGGTAAGGTTACACGCTTGAGGCTTTTAGGGGATAATGTGCATTCAACGCGAATTGCTTTTGTGGAATTTGTAATGGCAGAAAGTGCCATACTTGCCCTAAATTGTAGTGGAATGCTCTTGGGAACTCAGCCTATCAGGGTAAGTCCTTCGAAGACACCTGTGAGGCCGCGCTCGTCCAATATCACACTGACTGATCCAAATGGTCCATTACTTACCAGAGGCGATTCAGTCAACTTTGCAGCTGAGAGAAGTGTGGACTGGAAGGGGTGA | 969 | 0.4345 | MAAVGEIFGDAAADNKLDSKPKPENEVNVQKLFDMFTKLNPLAKEFIPPSYSHHDHRYLSYNQLSPNNFLVNNKPSDSDNYPNNRRRRNNFSQGRRLNGKVHKAQREDSIRRTVYVSDIDQHVTEERLAALFISCGQVIDCRICGDPHSILRFAFVEFSDERGARAALNLGGTVLGYYPVRILPSKTAILPVNPTFLPRSEDEREMCSRTVYCTNIEKKVSQAEVKNFFETACGKVTRLRLLGDNVHSTRIAFVEFVMAESAILALNCSGMLLGTQPIRVSPSKTPVRPRSSNITLTDPNGPLLTRGDSVNFAAERSVDWKG | 322 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bisa12g0386 | 322 | MobiDBLite | consensus disorder prediction | 71 | 103 | - | - | |
Bisa12g0386 | 322 | Gene3D | - | 197 | 293 | IPR012677 | - | |
Bisa12g0386 | 322 | Gene3D | - | 71 | 188 | IPR012677 | - | |
Bisa12g0386 | 322 | CDD | RRM2_CID8_like | 205 | 286 | IPR034825 | - | |
Bisa12g0386 | 322 | SUPERFAMILY | RNA-binding domain, RBD | 85 | 188 | IPR035979 | GO:0003676 | |
Bisa12g0386 | 322 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 209 | 285 | IPR000504 | GO:0003723 | |
Bisa12g0386 | 322 | PANTHER | SERINE/ARGININE-RICH SPLICING FACTOR | 35 | 291 | - | - | |
Bisa12g0386 | 322 | CDD | RRM1_CID8_like | 110 | 189 | IPR034823 | - | |
Bisa12g0386 | 322 | SMART | rrm1_1 | 210 | 281 | IPR000504 | GO:0003723 | |
Bisa12g0386 | 322 | SMART | rrm1_1 | 113 | 183 | IPR000504 | GO:0003723 | |
Bisa12g0386 | 322 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 114 | 176 | IPR000504 | GO:0003723 | |
Bisa12g0386 | 322 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 211 | 278 | IPR000504 | GO:0003723 | |
Bisa12g0386 | 322 | FunFam | Polyadenylate-binding protein-interacting protein 10 | 203 | 281 | - | - | |
Bisa12g0386 | 322 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 112 | 187 | IPR000504 | GO:0003723 | |
Bisa12g0386 | 322 | FunFam | Polyadenylate-binding protein-interacting protein 11 | 78 | 189 | - | - | |
Bisa12g0386 | 322 | Pfam | Ataxin-2 C-terminal region | 35 | 50 | IPR009818 | - | |
Bisa12g0386 | 322 | SUPERFAMILY | RNA-binding domain, RBD | 199 | 294 | IPR035979 | GO:0003676 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bisa12g0386 | Bisa-ChrBisa12 | 5388786 | 5393061 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bisa12g0386 | 109 | 266 | Eukaryotic Initiation Factors Gene Family | AT1G34140 | 24.224 | 1.04e-09 | 57.4 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Bisa12g0386 | 12 | 5388786 | 5393061 | Bisa12g0386 | 12 | 5388786 | 5393061 | ECH |