Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0378 ATGGCCTCTTTCCAGAACTTAAATGTTAAAACCCAAGTGCCGGAAGATTTCCTTATAGCTCAGATCATGCAACTCCATGCAAGCATATCTAAGCTAGAATCCCTCAAGCCTTCCAAGCAAGTCAATAGCCTCTTCACTCACCTTGTCAAACTCTGCACCCTCCCTTCCTCCATTGACATTCAAGCCATTCCCCAAGAGGTGAAGAACATGAGGGAGAGTCTCATTAACCTCTGTGGCCAAGCTGAAGGCCTCATGGAGCTAGAATTCTCAACTTTCCTTGCCCAGACTCCCAAACCCTTGAACAATCTCACTCTCTTCCCTTACTATGGGAACTATGTTAAACTAGCAAACATGGAGAACAGAATCCTCAAAGAACATGGGGTGGTTCATCCCAAGAAAGTAGCCTTTGTAGGGTCTGGTCCAATGCCACTCACTTCCATCATAATGGCCACGCATCACTTGGTATCCACACAGTTTGATAACTTTGACATCGATGAGAAAGCCAACGAGGCAGCTCGTAGGATTGTTGCTACGGATTCAGGGCTTGAGAAGAGGATGAAGTTTGAGACGAAAGATATCATGGAAGTGAAAGAGAAGTTGGGACAATATGACTGCATATTTCTAGCAGCTCTGGTGGGTATGAGCAGAGAAGCAAAAGCGAAGGTTTTGGGACGTGTGAAGAAATATATGAAGGAAGGAGGTGTTTTGTTAGTGAGAAGTGCAAAAGGGGCAAGAGCTTTCTTGTACCCTGTTGTTGAGGAGCATGACTTGGTGGATTTTGAGGTGCTAACCATCTTTCATCCCACAGACGATGTGATCAACTCAGTTCTTCTTCTTCGCAAGCCCATGATTTAG 855 0.4515 MASFQNLNVKTQVPEDFLIAQIMQLHASISKLESLKPSKQVNSLFTHLVKLCTLPSSIDIQAIPQEVKNMRESLINLCGQAEGLMELEFSTFLAQTPKPLNNLTLFPYYGNYVKLANMENRILKEHGVVHPKKVAFVGSGPMPLTSIIMATHHLVSTQFDNFDIDEKANEAARRIVATDSGLEKRMKFETKDIMEVKEKLGQYDCIFLAALVGMSREAKAKVLGRVKKYMKEGGVLLVRSAKGARAFLYPVVEEHDLVDFEVLTIFHPTDDVINSVLLLRKPMI 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0378 284 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 11 284 IPR004298 GO:0030410|GO:0030418
Bisa12g0378 284 CDD AdoMet_MTases 162 238 - -
Bisa12g0378 284 PANTHER NICOTIANAMINE SYNTHASE 3 12 282 IPR004298 GO:0030410|GO:0030418
Bisa12g0378 284 Pfam Nicotianamine synthase protein 15 282 IPR004298 GO:0030410|GO:0030418
Bisa12g0378 284 Gene3D Vaccinia Virus protein VP39 18 282 IPR029063 -
Bisa12g0378 284 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 121 240 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0378 Bisa-ChrBisa12 5274226 5275080 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0378 16 281 Nicotianamine Synthase Gene Family AT5G56080 53.704 3.74e-97 286