Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0370 ATGAGCATGTCCTGTGCCACCACCTTGTTCCTCTCACTTTCCCTCCTTTACCTTCAATCCATTCTTCTTGTTAATGCTTACAGTCCCACTGATCAATTCACCATCAATTGTGGCTCCTTCGGGAATTCTTTCGATGGTGAACGGACATGGACAGGGGACATTAACTCTAAGCTCTTATCCACACAAAAAGAACCGCTTTCAGTTCCCGCTGAGGCATCCTTCCAGTCTTCTCCTACCAAACAGGTCCCATACTCCACAGCTCGTAGCTCTCACTCCCAATTCACCTATTCCATTCCTGTCACCTCAGGCCAGAAATTCATTCGCCTCTTTTTCTACCCAGCTTCATACCCAGGTTTTGATCGCTCTAACGCATTGTTTACTGTAAAAGCTGGTAACTTCACGCTCCTTAAGGACTTCAACGCTTCTCTCACTGCTGATGCTGTTGGTGACAGCAGCGTCACCATCTTCAGAGAATATTGCATCAACGTGGATGACGGGCAGAGGCTGAACTTAACCTTCACCCCAAGCACAAGAACGAACCCAGATGCCTATGCTTTCATCAATGGAATCGAGATCGTGTCCATGCCCACCGATCTCTACTACACCAAATTCGACAGTATGGGGATTCCATTTGTGGGTCATAGTGGAACTCCATACTCAATCGGAAACAACTCTGCTTTGGAGACACAATATCGGCTCAACTGGGAGGACAACCACTCACGCTTCGTCAAGATACAGGGATGCTCAGCTGTTAACGTTACTTACAGTAATATTCCTAATTATACAGCACCTGCTGAAATCTATCAAACAGCGAGGTCTATGGGAATGAACACTAGTCTCAACAGGAGGGTTAACCTGACTTGGGAATTTTTGGTTGATTCTGGGTTTACCTACATGGTTAGGCTACATTTTTGCCAGCTTGACCCAATCATTAAAGGTCCCGGTGACCAAGTGTTCTTCATCTATATAGCGGAACAGTTAGCTGAAGATTCTGCAGATGTTATGAGATGGACGAAATGGGGGGTTCCGATTTACAAAGACTACGCTGTTTCTATGGTAGGAAATCAGAAGAAGGCGAAGCTTTTACTCCAAATGCATCCACTCCCCGATACATACACTAGATACAGCGATGCGTTCTTGAACGGACTCGAAATTTTCAAAATCAGCGACCAAAGTGATAATCTCTCCGGACCCAACCCTGACCCTCTCTCTACTCCGCCCAACTCTGGTTCATCCGTTCAGAACTCGAAGAAAGGTGGCAGTAATACAACGGCAATGATTGGCGTCGGTGCTGGTGTGGTTGCCGGTGTCGTTTTTCTTTCAATCGTAGTCATTTTCTTTGCCACCAACAGACGGAAGAGAGTCCATTATTCAAAATCCACTGACTCCCAAGGCTCGCCTTTGCCGTCCAATCTCTGCCGTTACTTTTCACTCGCTGATATCAAAGCCGCCACCAAAAACTTCGACGCGCTTTTCATCATCGGCGTGGGAGGATTCGGCGACGTGTACAAAGGCTATATTGACAACGGGACCACTCCGGTGGCGATCAAGCGGCTCAAACAAGGTTCACATCAAGGGGCCCATGAATTCAAGACTGAGATTGAAATGTTGTCCCAACTTTGTCACCTTCATCTTGTGTCTCTCGTTGGTTACTGTAACGAAAACAATGAGATGATCTTGGTGTATGTGGAACTCTCGGTGACCATCTTTATAACACTGACAACTCACCTCTCAGGTGGAAGCAACGGCTTCAGATTTGTATAG 1764 0.4654 MSMSCATTLFLSLSLLYLQSILLVNAYSPTDQFTINCGSFGNSFDGERTWTGDINSKLLSTQKEPLSVPAEASFQSSPTKQVPYSTARSSHSQFTYSIPVTSGQKFIRLFFYPASYPGFDRSNALFTVKAGNFTLLKDFNASLTADAVGDSSVTIFREYCINVDDGQRLNLTFTPSTRTNPDAYAFINGIEIVSMPTDLYYTKFDSMGIPFVGHSGTPYSIGNNSALETQYRLNWEDNHSRFVKIQGCSAVNVTYSNIPNYTAPAEIYQTARSMGMNTSLNRRVNLTWEFLVDSGFTYMVRLHFCQLDPIIKGPGDQVFFIYIAEQLAEDSADVMRWTKWGVPIYKDYAVSMVGNQKKAKLLLQMHPLPDTYTRYSDAFLNGLEIFKISDQSDNLSGPNPDPLSTPPNSGSSVQNSKKGGSNTTAMIGVGAGVVAGVVFLSIVVIFFATNRRKRVHYSKSTDSQGSPLPSNLCRYFSLADIKAATKNFDALFIIGVGGFGDVYKGYIDNGTTPVAIKRLKQGSHQGAHEFKTEIEMLSQLCHLHLVSLVGYCNENNEMILVYVELSVTIFITLTTHLSGGSNGFRFV 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0370 587 FunFam Receptor-like protein kinase FERONIA 460 564 - -
Bisa12g0370 587 PANTHER OS03G0124300 PROTEIN-RELATED 5 455 IPR046957 GO:0004672
Bisa12g0370 587 Pfam Protein tyrosine and serine/threonine kinase 494 562 IPR001245 GO:0004672|GO:0006468
Bisa12g0370 587 FunFam FERONIA receptor-like kinase 228 389 - -
Bisa12g0370 587 SUPERFAMILY Protein kinase-like (PK-like) 456 562 IPR011009 -
Bisa12g0370 587 Gene3D Phosphorylase Kinase; domain 1 448 563 - -
Bisa12g0370 587 MobiDBLite consensus disorder prediction 394 419 - -
Bisa12g0370 587 ProSiteProfiles Protein kinase domain profile. 488 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0370 587 ProSitePatterns Protein kinases ATP-binding region signature. 494 517 IPR017441 GO:0005524
Bisa12g0370 587 FunFam FERONIA receptor-like kinase 32 196 - -
Bisa12g0370 587 Gene3D - 220 389 - -
Bisa12g0370 587 Gene3D - 32 197 - -
Bisa12g0370 587 Pfam Malectin-like domain 35 388 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0370 Bisa-ChrBisa12 5022892 5024723 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0370 27 562 Receptor kinase-like Gene Family AT3G51550 43.581 8.40e-133 408
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Bisa12g0370 Malectin_like 1.6e-34 CL0202