Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0358 ATGGCAATAAACTGGTTTTACTCGGTGCTAATATTTTCTTTTGGCATCTTCCTAGTAAGTTCCATTAATGAGGAGGGTTTAAATCTTTTGGAGTTTAAGGGCTCCCTTAATGACTCACTAAATAATCTCCATAACTGGAATTCTTCTGATTTGACTCCTTGCAATTGGAAAGGTGTGCATTGCACTGATTCAATGGTAACTTCTATAAATCTTTTTCAACTTAATCTGTCTGGTGCTTTGTCTCCTAGCATCTGTAATCTTCCTCGACTAGTTGAGTTGAATCTGTCAAAAAATTTCATTTCTGGTCCCATTCCTGCTGATTTTGTTAACTGTCGTAGTATGGGGATATTAGACCTTTGCACAAATAGGTTCCATGGAGAACTTCTGATCCCTTTCTGCAAAATCACCACTCTTAGAAAGCTTTATCTCTGTGAAAATTATATGTATGGTGAAATGACGAAAGAGATTGGGAATTTGGCATCACTTGAAGAGCTAGTCATATATAGCAATAACTTAACTGGAAGAATTCCCACATCAATCGGTAAGTTGAAGCAGCTTAAAATCATCAGGGCAGGCCTGAATAGCTTCACGGGTCCCATACCAGCCGAAATAAGCGAGTGTGAAAGCTTGGAGATTTTAGGATTGGCACAGAATCAGCTACAAGGGTCCATTCCAAGGGAACTTCAAAAACTTAAGAACCTTACCAACATAATTCTATGGGAAAACTGTTTATCTGGTGAGATTCCTCCTGAGATTGGAAATTTCAGTAGCCTGCAAATGCTTGCCCTGCATCAAAATTCGTTTGGTGGAGCTCTTCCGAAGGAGTTAGGAAAGTTGTCACAGTTACAAAAGTTGTACATATACACCAACCACTTGAATGGCACAATTCCTCCGGAGCTAGGGAACTGTACAAGTGCTATTGAGATTGATCTATCTGAAAATCGTTTGAGTGGGATTATTCCCAGAGAGTTGGGTCAAATCTCCAATCTTAGCTTGCTTCATCTATTTGAAAACCATCTGCAAGGAGAGATCCCTCAGGAGCTCGGGAAGTTAAAGCTGTTACAGAAATTAGACCTGTCAATGAATAATTTAACGGGTACAATTCCACTAGTGTTTCAGAATCTTACATACATGGAGGATTTGCAACTATTTGACAATAAACTTGAGGGTAAGATTCCTCCTCATCTTGGAGCTAATAGTAGCCTCATTATTCTTGATATCTCTGCAAATAATCTTGTTGGTATGATACCTGTTCATCTTTGCCACTATCAGAAGTTGCAATTCCTGAGCCTTGGGTCAAATGGGTTATTTGGTAATATTCCATATGATCTGAAAACATGCAAGTCTCTAGTGCAGCTAATGCTGGGGGACAACCAACTGACAGGAAGCTTCCCTGATGAATTGTATGAACTTCATAATCTTTCTGCTCTTGAGCTTCATCAGAATCGGTTCTCTGGGTTATTAAACCACGGGATAGGTCGGCTTAGGAAATTAGAAAGGCTCCTCTTATCGGATAATTATTTCGTTGGGTACCTCCCTTCTGAGATTGGGAATTTAACACAGCTTGGCTCATTCAACATCTCCACAAATCGCCTCAGTGGAAGTATACCTCATGAGTTGGGAAACTGCATAAAACTCCAGAGGCTTGATCTTAGTAGAAATCAGTTCAGTGGTGAGCTTCCTGATGATATTGGAAAGCTGGTGAATCTGGAGCTGTTGAAGTTGTCGGATAATAGATTCTCTGGAGCAATACCAAGTACTTTAGGGGATCTTACTCGCCTGACAGACTTGGAACTAGGTGGTAACTTATTTTCTGGGAGCATTCCTTTTCAATTGGGTCATCTAACTGCTCTTCAGATTGCTCTAAACCTGAGCTATAACAATCTTTCTGACGCAATTCCTGACAGCCTGGGGAGCTTGCAAATGTTGGAATCCCTTTACTTAAATGACAATCAACTTATTGGTGAAATTCCTGCATCAATTGGTGGACTGCCCAGCCTTATAGTATGCAATGTTTCAAACAATAATTTGGAAGGGACCATTCCAGACACCCCTGCATTTCGAAGGATGGATTTTACAAATTTTGTTGGAAACAATGGTTTGTGTCGAGTAGGTTCATCTTATTGTCGTCCATCTCGTACTCCAAAACCAAGCTGGATCAGAGATGGTTCATCAAGGGAGAAGATAGTGAGCATTGTTTCTGGGGTGGTTGGATTTGTTTCTCTTATTTTCATAGCCTGTATATGTTGGGCCATGAAGCGCCCTAGCCCTGATATTGTCTCGTTTGAAGGGCAAAGAAAGCCTCATGTCCTTGATAACTATTACTTCCCTAAAGAAGGTTTCACATACCAGGATCTTTTGGAAGCCACCGGCAATTTTTCAGAAGCGGTAGTTATAGGAAGAGGAGCTTGTGGCACCGTCTACAAGGCTGTTATGGCTGATGGTGAGATAATTGCTGTGAAAAGGCTGAATTCTCGTGGAGAAGGAGCAAATGTTGACAGAAGCTTCCTTGCAGAAATTTCAACTCTTGGAAAGATCAGGCACAAAAATATCGTGAAGCTGTTTGGATTCTGTTGTCATGAGGATTCTAATATTCTCTTGTATGAATACATGGAAAATGGCAGCCTTGGTGAACAACTTCATTCGGATCCAAGTTCGTGTTTACTGGGATGGAATAGTAGATATAAAATTGCTCTTGGAGCTGCAGAAGGCTTGTGCTATCTTCATTATGACTGTAAACCTCAAATCATCCACCGTGATATAAAGTCAAATAATATATTACTCGATGAATTGTTTCAGGCTCATGTTGGAGACTTCGGCTTGGCTAAGTTGATTGACTTTTCGTACTCTAAATCCATGTCTGCTGTGGCAGGTTCATATGGCTATATAGCCCCCGAATATGCTTACACCATGAAGGTGACTGAGAAATGTGACATCTACAGCTTTGGGGTAGTTTTGCTGGAACTAGTTACTGGGAGGTCACCTGTTCAACCTTTGGAACAGGGTGGTGATCTAGTTACTTGGGTGAGAAGATCAATTCAAGCATCAGCACCAGTATCTGAATTATTTGACAAGCGACTGAATTTGAGTGCACCAAGAACAATGGAAGAGATAGCTCTCGTTCTAAAAATTGCTCTGTTTTGCACCAGTGCATCTCCACTTAATAGGCCAACAATGAGAGAGGTCATCGCAATGTTGATTGATGCTAGGGAGTATGTCAGCAATTCTCCATTGACTCCTACGTCTGAAACCCCACTAGACGAAGATTCCTCTTCCAAAGATGGTCTTGAGTTGTGA 3297 0.4095 MAINWFYSVLIFSFGIFLVSSINEEGLNLLEFKGSLNDSLNNLHNWNSSDLTPCNWKGVHCTDSMVTSINLFQLNLSGALSPSICNLPRLVELNLSKNFISGPIPADFVNCRSMGILDLCTNRFHGELLIPFCKITTLRKLYLCENYMYGEMTKEIGNLASLEELVIYSNNLTGRIPTSIGKLKQLKIIRAGLNSFTGPIPAEISECESLEILGLAQNQLQGSIPRELQKLKNLTNIILWENCLSGEIPPEIGNFSSLQMLALHQNSFGGALPKELGKLSQLQKLYIYTNHLNGTIPPELGNCTSAIEIDLSENRLSGIIPRELGQISNLSLLHLFENHLQGEIPQELGKLKLLQKLDLSMNNLTGTIPLVFQNLTYMEDLQLFDNKLEGKIPPHLGANSSLIILDISANNLVGMIPVHLCHYQKLQFLSLGSNGLFGNIPYDLKTCKSLVQLMLGDNQLTGSFPDELYELHNLSALELHQNRFSGLLNHGIGRLRKLERLLLSDNYFVGYLPSEIGNLTQLGSFNISTNRLSGSIPHELGNCIKLQRLDLSRNQFSGELPDDIGKLVNLELLKLSDNRFSGAIPSTLGDLTRLTDLELGGNLFSGSIPFQLGHLTALQIALNLSYNNLSDAIPDSLGSLQMLESLYLNDNQLIGEIPASIGGLPSLIVCNVSNNNLEGTIPDTPAFRRMDFTNFVGNNGLCRVGSSYCRPSRTPKPSWIRDGSSREKIVSIVSGVVGFVSLIFIACICWAMKRPSPDIVSFEGQRKPHVLDNYYFPKEGFTYQDLLEATGNFSEAVVIGRGACGTVYKAVMADGEIIAVKRLNSRGEGANVDRSFLAEISTLGKIRHKNIVKLFGFCCHEDSNILLYEYMENGSLGEQLHSDPSSCLLGWNSRYKIALGAAEGLCYLHYDCKPQIIHRDIKSNNILLDELFQAHVGDFGLAKLIDFSYSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELVTGRSPVQPLEQGGDLVTWVRRSIQASAPVSELFDKRLNLSAPRTMEEIALVLKIALFCTSASPLNRPTMREVIAMLIDAREYVSNSPLTPTSETPLDEDSSSKDGLEL 1098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0358 1098 Gene3D Ribonuclease Inhibitor 375 715 IPR032675 -
Bisa12g0358 1098 Gene3D Ribonuclease Inhibitor 284 372 IPR032675 -
Bisa12g0358 1098 Gene3D Phosphorylase Kinase; domain 1 763 870 - -
Bisa12g0358 1098 ProSitePatterns Serine/Threonine protein kinases active-site signature. 916 928 IPR008271 GO:0004672|GO:0006468
Bisa12g0358 1098 SMART serkin_6 793 1073 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0358 1098 MobiDBLite consensus disorder prediction 1076 1098 - -
Bisa12g0358 1098 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 871 1083 - -
Bisa12g0358 1098 SUPERFAMILY RNI-like 308 683 - -
Bisa12g0358 1098 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 471 1067 - -
Bisa12g0358 1098 Gene3D Ribonuclease Inhibitor 74 283 IPR032675 -
Bisa12g0358 1098 Gene3D Ribonuclease Inhibitor 18 73 IPR032675 -
Bisa12g0358 1098 Gene3D Transferase(Phosphotransferase) domain 1 871 1080 - -
Bisa12g0358 1098 SUPERFAMILY RNI-like 68 389 - -
Bisa12g0358 1098 Pfam Leucine rich repeat N-terminal domain 23 61 IPR013210 -
Bisa12g0358 1098 Pfam Protein kinase domain 795 1063 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0358 1098 Pfam Leucine Rich Repeat 643 664 IPR001611 GO:0005515
Bisa12g0358 1098 Pfam Leucine Rich Repeat 545 567 IPR001611 GO:0005515
Bisa12g0358 1098 ProSiteProfiles Protein kinase domain profile. 793 1073 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0358 1098 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 402 713 - -
Bisa12g0358 1098 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase isoform B 176 272 - -
Bisa12g0358 1098 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase isoform B 273 375 - -
Bisa12g0358 1098 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 21 175 - -
Bisa12g0358 1098 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 759 870 - -
Bisa12g0358 1098 SMART LRR_typ_2 471 495 IPR003591 -
Bisa12g0358 1098 SMART LRR_typ_2 351 374 IPR003591 -
Bisa12g0358 1098 SMART LRR_typ_2 87 111 IPR003591 -
Bisa12g0358 1098 SMART LRR_typ_2 640 664 IPR003591 -
Bisa12g0358 1098 SMART LRR_typ_2 159 183 IPR003591 -
Bisa12g0358 1098 SMART LRR_typ_2 231 255 IPR003591 -
Bisa12g0358 1098 SMART LRR_typ_2 519 543 IPR003591 -
Bisa12g0358 1098 SMART LRR_typ_2 279 303 IPR003591 -
Bisa12g0358 1098 SMART LRR_typ_2 615 639 IPR003591 -
Bisa12g0358 1098 SMART LRR_typ_2 567 591 IPR003591 -
Bisa12g0358 1098 SUPERFAMILY Protein kinase-like (PK-like) 770 1066 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0358 Bisa-ChrBisa12 4802177 4807536 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0358 47 1071 Receptor kinase-like Gene Family AT1G73080 38.412 0.0 655
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bisa12g0358 Pkinase 2.8e-46 CL0016