Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0357 ATGGACGAAGATACCTTTTATCCTCCCGATGCAGATCTTGACCACAGCTTCACCAGCTCCACCTCCGCCGCCACCGACCGCACCTTCGCTTCCTCCAGCGCTCGCACCAGCTTGGCTCGCAGCAGCTTAACTCTCAGCTTCAATGACCGTCTCTCCACTGCTTCCGCCGCAGCCTCCGCAACGTCCTCTTCCACCGTCTTCCTCCGCCCCCACCGCGCCTCCGATCCTCACTGGTCAGCCATCAAAGCAGCCACCACCCTCTCCTCCGACGGCGCCCTCCACCTCCGCCACCTCAAGCTCCTCCGCCACCTCGGCACCGGGAATCTCGGACGCGTCTTCCTCTGCCGCCTCCGCGACTATGATCACGCGAATTTCGCTCTTAAGGTCGTTGATAAGGACTTGCTCAGCAGCAAGAAGCTCTCTCATGTCCAAACGGAGGGAGAGATCCTATCCATGCTGGACCACCCTTTTCTCCCTACGCTCTACGCCAAATTGGAGGTCTCGCATTACACGTGTCTCCTCATCGATTATTGCCCAGGCGGTGATCTCCACTCGCTCCTTCGCAAACAACCAACTAACCGGCTTCCGGTTCAGGCGGTTCGGTTCTTCGCCGCGGAGGTGCTGGTTGCGTTGGAATACCTGCATGCGCTTGGCGTGATCTATCGGGATCTGAAACCAGAGAACGTTCTGTTACGCGAGGACGGCCACGTCATGCTGTCCGATTTCGATTTGTGCTTCAAGGCCGACGTGGTCCCCACATTCGACTTCCGGGTCCACGACGTGGTGAGGCCATTTAAGAACAAGCGCGGGTGCACATGTTTCGATGCGGTGAACCGCAGGGGAAAAAAATTGCCGCACCAATTTGTCGCGGCGGAGTTCGTGGCGGAGCCGACGGCAGCTTTCTCGAGGTCTTGCGTTGGGACGCACGAGTACTTGGCGCCGGAGCTTGTCTCGGGGAACGGCCACGGAAACGGCGTGGACTGGTGGGCGTTCGGGGTTTTCATTTACGAGTTGTTGTGCGGGACGACGCCGTTTAAAGGGTGGAGCAAAGAGAGCACCCTGCGCAATATAGCATCGACAAGAGACGTTAGTTTCCACGTGGCGGAAGTAGAGGAAGAAGGGATGGCGGAAGCGAGGGATTTGATAGAGAAGCTGTTGGTGAAGGACCCGAGGAGGAGGCTAGGATGCGCCAGGGGTGCGACGGATATTAAACGACACCCGTTTTTTGGCGGGATCAAGTGGCCGTTGATCCGAACCTATAGGCCACCGGAGGTTCGGGGCCTCATGAGGAAGGCGAGGTCGCACGTGAGCAGTCACGTGACTCACAGAAGAAGGCGATGGTGGTGGAAGGGGCTTGATTATATTCTCAGGAGAAATAAGGGATCTAAATATAATTTAATTTCCAACCATAGTAATGGCAATTACTATCACTATGTTAATAGCAATAAGGTTAGGAAATGCGCTTGA 1467 0.5631 MDEDTFYPPDADLDHSFTSSTSAATDRTFASSSARTSLARSSLTLSFNDRLSTASAAASATSSSTVFLRPHRASDPHWSAIKAATTLSSDGALHLRHLKLLRHLGTGNLGRVFLCRLRDYDHANFALKVVDKDLLSSKKLSHVQTEGEILSMLDHPFLPTLYAKLEVSHYTCLLIDYCPGGDLHSLLRKQPTNRLPVQAVRFFAAEVLVALEYLHALGVIYRDLKPENVLLREDGHVMLSDFDLCFKADVVPTFDFRVHDVVRPFKNKRGCTCFDAVNRRGKKLPHQFVAAEFVAEPTAAFSRSCVGTHEYLAPELVSGNGHGNGVDWWAFGVFIYELLCGTTPFKGWSKESTLRNIASTRDVSFHVAEVEEEGMAEARDLIEKLLVKDPRRRLGCARGATDIKRHPFFGGIKWPLIRTYRPPEVRGLMRKARSHVSSHVTHRRRRWWWKGLDYILRRNKGSKYNLISNHSNGNYYHYVNSNKVRKCA 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0357 488 FunFam Serine/threonine-protein kinase OXI1 182 250 - -
Bisa12g0357 488 Gene3D Transferase(Phosphotransferase) domain 1 182 248 - -
Bisa12g0357 488 FunFam Serine/threonine-protein kinase OXI1 300 427 - -
Bisa12g0357 488 Pfam Protein kinase domain 302 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0357 488 Pfam Protein kinase domain 100 247 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0357 488 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Bisa12g0357 488 Gene3D Transferase(Phosphotransferase) domain 1 302 424 - -
Bisa12g0357 488 SMART serkin_6 98 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0357 488 Gene3D Phosphorylase Kinase; domain 1 97 181 - -
Bisa12g0357 488 SUPERFAMILY Protein kinase-like (PK-like) 78 437 IPR011009 -
Bisa12g0357 488 PANTHER FLIPPASE KINASE 1-RELATED 35 427 - -
Bisa12g0357 488 ProSiteProfiles Protein kinase domain profile. 98 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0357 Bisa-ChrBisa12 4795495 4796961 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0357 1 482 AGC Kinase Gene Family AT3G14370 66.057 0.0 598
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Bisa12g0357 Pkinase 3.6e-33 CL0016