Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0355 ATGCTTATATTAGTGGGCAACGTTCAAGGGACAATGGCTTCTCTTGCTTCCCCAGTCAGTTTGGGAGGTCTAGTTGGAGTGAGTTCTTCGGGAAGGACCCATTCTTTTGGAAGGAGAGTTTCTCTTTCTAGAGGAAACTTTAAGGGTAGAAAGAGATGTCATTGCATCTCCTTGTCTGTTTGTAGATATTCAGTGATTACGACTGATTTCATATCTGACCAAGGCAATGCAGTGTCCCTTGACTCTAATAGTGATAAAGGAAGTAAAGGTAGTGGAGATGACAGTGCTGGTTTTATCCTTAAGCCTCCTCCAAAGCCAGTATTGAAGTCCTCAGAGGCAAAGGGTGACCCCATTTTAGGCATGAATTCTGAAGGGTGGGATCCCTCCAGAGCTACTAAGAAAATTGATAGTGAAAAGTTAGATGAGGTAGAAGAGAGGAATAAAGTGATTGAATCACTTGGAGAGGTGCTGGAGAAGGCCGAAAAGCTGGAAAGTCCAAAGTTGGATGGTAAAAGAAATAATGGACCGGTGAAAAGACCAGCAATATCAAATACAATCACTAATCCTAAGACTGATAAAGCGGTAAGTTCAACAACAAACCAGAAGTCTAAAACCGTGAAGAGTGTATGGCGTAAGGGGGACACAGTTGCTAATGTGCAGAAGGCTGTAAAGGAAGCACCCAAGCCTAATGCTAAGAATGAAGGAGATAAATCTCAAACAGCAGAAGGGGTAAGAGTAACACGACAATCGCGTGCTCCTCCAAGAGCTCCTCAGCAACCGTCAAGACCTCAACCAATGTTACAAGCAAAACCTTCTGCTGCTCCCCCACCCATAAAAAAACCTATTTTGAAGGACAACGGAGCAGCTGGCTCACCAGTTAGAGAAAGGAAGCCAATTTTGATTGACAAGTTTGCAAACAAGAAACCGGTAGTTGATCCTATAATTGCTCAAGCAGTTCTAGCCCCTAAAAAACCAGGAAAGGGCCCTCCTCCAGGAAAGTTTAAAGATGATTACCGAAAGAAAAGTGCTCCGGCTGGAGGACCAAGGAGACGAGTATTAGAGGATGATGATGGGATTCCTGATGAGGACACGTCAGAACTCAATGTCTCTATTCCTGGTACTGCAACAGCAAGAAAAGGTAGGAAATGGAGTAAAGCAAGTCGAAAGGCAGCAAGACTCCAGGCTGCCAAGGAGGCAGCTCCTGTCAAAGTAGAAATTTTAGAGGTCAGTGATAAAGGTATGCTGATAGAGGAATTAGCCTACAACTTGGCAATCAGTGAAGGAGAAATTCTGGGTTATTTATACGCCAAGGGGATTAAACCAGATGGGGTGCAAACTCTAGGCAAAGATATGGTGAAGATGATTTGTAAAGAGCAAGGTGTGGAAGTCATAGATGCTGATCCTGTCAAAGTTGAAGGGTTAGTGAAGAAAAGGGAAATTCTTGATGATGATGACCTTGACAAACTCAAAGATAGGCCTCCTGTCATTACTATAATGGGTCATGTGGATCATGGCAAGACAACTCTTTTGGATCATATTCGGAAGAGCAAGGTAGCTGCTTCAGAAGCTGGTGGGATTACCCAAGGAATTGGGGCATATAGAGTGCAAGTCCCTGTGGATGGCAAATTGCTGCCTTGTGTTTTTCTTGACACTCCAGGTCATGAGGCATTTGGGGCAATGAGAGCTCGAGGAGCAAGTGTAACAGATGTTGCTATCATTGTTGTGGCTGCTGATGATGGAATTCGTCCTCAAACAAATGAAGCCATTGCTCATGCCAAAGCAGCCGGAGTACCTATAATTATTGCTATAAACAAGATAGATAAAGATGGAGCAAATCCAGAACGAGTCATGCAAGAACTTTCTTCGATTGGTCTAATGCCAGAAGATTGGGGTGGTGACACACCAATGGTTCAGATAAGTGCTCTTAAAGGGGAGAATGTAGATGATCTACTGGAAACTGTTATGCTTGTTGCTGAGTTGCAAGAGCTGAAAGCAAATCCTGATAGAAGTGCAAAGGGCACAGTCATTGAGGCAGGTCTGGATAAATCAAAAGGACCATTTGCTACATTTATCGTGCAGAATGGCACCCTTAAAAGGGGAGATGTAGTGTTTTGTGGAGAAGCTTTTGGAAAGGTGAGGGCTTTATTTGATGATGGTGGAAAACGTGTCGATTCAGCTACACCCTCTATACCTGTACAGGTTATTGGATTGAACAATGTTCCAATTGCTGGTGATGAATTTGAGGTTGTTCACTCCCTTGATGCTGCACGTGAAAAGGCAGAGTCCCGTGCTGAATCATTGCGATATGAGCGTATTTCAGCTAAGGCAGGGGATGGCAAGGTCACCCTATCTTCATTTGCATCTGCAGTTTCAGCAGGAAAGCTTTCTGGATTAGACTTGCACCAACTAAACATTATCTTGAAGGTTGATCTTCAGGGATCCATTGAAGCTATCAGACAAGCCTTGCAGGTTTTACCACAAGATAATGTCACATTGAAGTTTTTGTTGGAAGCAACAGGGGATGTAAGCACCAGTGATGTTGACCTTGCAGTTGCAAGCAAAGCTATTATTTTGGGATTTAATGTCAGAGCACCAGGTTCTGTAAAAAGCTATGCAGAGAATAAACTCGTTGAGATTAGATTATATAGAGTTATTTATGAACTAATTGATGATGTGCGGAATGCAATGGAAGGACTCCTGGAGCCTATTGAGGAGCAAGTAACAATTGGCTCTGCAGAAGTAAGGGCCACATTCAGTAGTGGTAGTGGTCGTGTTGCTGGATGCATGGTTACAGAGGGAAAAATAACAAAAGACTGTGGCATTCGGGTCATTCGTAAGGGAAAAGAAATTCATGTTGGTATTCTTGATTCTTTGAGACGGGTGAAGGAGATAGTGAAAGAGGTAAATGCTGGTCTAGAGTGTGGAATTGGATTACAAGATTACGACGAATGGGAAGAGGGAGATATTATCGAGGCGTTCAACTCGGTTCAGAAGAAGCGGACCCTTGAAGAGGCATCAGCATCTATGGCAGCTGCAGTGGAAGGAGTAGGAGTTTAA 3057 0.4351 MLILVGNVQGTMASLASPVSLGGLVGVSSSGRTHSFGRRVSLSRGNFKGRKRCHCISLSVCRYSVITTDFISDQGNAVSLDSNSDKGSKGSGDDSAGFILKPPPKPVLKSSEAKGDPILGMNSEGWDPSRATKKIDSEKLDEVEERNKVIESLGEVLEKAEKLESPKLDGKRNNGPVKRPAISNTITNPKTDKAVSSTTNQKSKTVKSVWRKGDTVANVQKAVKEAPKPNAKNEGDKSQTAEGVRVTRQSRAPPRAPQQPSRPQPMLQAKPSAAPPPIKKPILKDNGAAGSPVRERKPILIDKFANKKPVVDPIIAQAVLAPKKPGKGPPPGKFKDDYRKKSAPAGGPRRRVLEDDDGIPDEDTSELNVSIPGTATARKGRKWSKASRKAARLQAAKEAAPVKVEILEVSDKGMLIEELAYNLAISEGEILGYLYAKGIKPDGVQTLGKDMVKMICKEQGVEVIDADPVKVEGLVKKREILDDDDLDKLKDRPPVITIMGHVDHGKTTLLDHIRKSKVAASEAGGITQGIGAYRVQVPVDGKLLPCVFLDTPGHEAFGAMRARGASVTDVAIIVVAADDGIRPQTNEAIAHAKAAGVPIIIAINKIDKDGANPERVMQELSSIGLMPEDWGGDTPMVQISALKGENVDDLLETVMLVAELQELKANPDRSAKGTVIEAGLDKSKGPFATFIVQNGTLKRGDVVFCGEAFGKVRALFDDGGKRVDSATPSIPVQVIGLNNVPIAGDEFEVVHSLDAAREKAESRAESLRYERISAKAGDGKVTLSSFASAVSAGKLSGLDLHQLNIILKVDLQGSIEAIRQALQVLPQDNVTLKFLLEATGDVSTSDVDLAVASKAIILGFNVRAPGSVKSYAENKLVEIRLYRVIYELIDDVRNAMEGLLEPIEEQVTIGSAEVRATFSSGSGRVAGCMVTEGKITKDCGIRVIRKGKEIHVGILDSLRRVKEIVKEVNAGLECGIGLQDYDEWEEGDIIEAFNSVQKKRTLEEASASMAAAVEGVGV 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0355 1018 CDD IF2_eIF5B 494 660 - -
Bisa12g0355 1018 NCBIfam small GTP-binding protein domain 493 654 IPR005225 GO:0005525
Bisa12g0355 1018 MobiDBLite consensus disorder prediction 321 368 - -
Bisa12g0355 1018 CDD IF2_mtIF2_II 671 765 IPR044145 -
Bisa12g0355 1018 FunFam Translation initiation factor IF-2 488 666 - -
Bisa12g0355 1018 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 491 664 IPR000795 GO:0003924|GO:0005525
Bisa12g0355 1018 Gene3D - 488 666 IPR027417 -
Bisa12g0355 1018 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 486 667 IPR027417 -
Bisa12g0355 1018 FunFam Translation initiation factor IF-2 667 784 - -
Bisa12g0355 1018 Pfam Elongation factor Tu GTP binding domain 496 656 IPR000795 GO:0003924|GO:0005525
Bisa12g0355 1018 Pfam Translation-initiation factor 2 799 892 IPR023115 -
Bisa12g0355 1018 FunFam Translation initiation factor IF-2 904 1001 - -
Bisa12g0355 1018 SUPERFAMILY Translation proteins 906 1000 IPR009000 -
Bisa12g0355 1018 MobiDBLite consensus disorder prediction 329 357 - -
Bisa12g0355 1018 FunFam Translation initiation factor IF-2 799 904 - -
Bisa12g0355 1018 Coils Coil 750 770 - -
Bisa12g0355 1018 ProSitePatterns Initiation factor 2 signature. 953 975 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Bisa12g0355 1018 SUPERFAMILY Translation proteins 667 750 IPR009000 -
Bisa12g0355 1018 MobiDBLite consensus disorder prediction 77 145 - -
Bisa12g0355 1018 MobiDBLite consensus disorder prediction 164 298 - -
Bisa12g0355 1018 PRINTS GTP-binding elongation factor signature 547 557 IPR000795 GO:0003924|GO:0005525
Bisa12g0355 1018 PRINTS GTP-binding elongation factor signature 495 508 IPR000795 GO:0003924|GO:0005525
Bisa12g0355 1018 PRINTS GTP-binding elongation factor signature 599 608 IPR000795 GO:0003924|GO:0005525
Bisa12g0355 1018 PRINTS GTP-binding elongation factor signature 563 574 IPR000795 GO:0003924|GO:0005525
Bisa12g0355 1018 CDD mtIF2_IVc 910 992 - -
Bisa12g0355 1018 Gene3D Translation factors 667 782 - -
Bisa12g0355 1018 Gene3D Translation factors 904 1001 - -
Bisa12g0355 1018 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 206 1008 IPR015760 -
Bisa12g0355 1018 Gene3D - 799 903 IPR036925 -
Bisa12g0355 1018 MobiDBLite consensus disorder prediction 129 145 - -
Bisa12g0355 1018 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 798 910 IPR036925 -
Bisa12g0355 1018 Hamap Translation initiation factor IF-2 [infB]. 7 1000 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Bisa12g0355 1018 MobiDBLite consensus disorder prediction 178 206 - -
Bisa12g0355 1018 NCBIfam translation initiation factor IF-2 413 1002 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0355 Bisa-ChrBisa12 4762979 4771758 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0355 492 890 Eukaryotic Initiation Factors Gene Family AT1G76810 29.185 8.49e-28 119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g0355 12 4762979 4771758 Bisa12g0355 12 4762979 4771758 ECH