Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0352 ATGCCCCTGCGCGAGTACATTGAAGATTCCACCGAATCTCGGTCTCTGTTGCTGCGCTGTTTAGAATGCAGAATTGGGGGTCCTCTCTGTAAACCGGACCTCAATTTAGAGGAATTCAACTATAAGGTTATTGCCATGGTTGGAAAGGGCACGTTTAACAATGTTTACTGTTGTTATCAGCTCAATACCCGCCAAACCGTGGCCATAAAGGAGATTGTCGTCAGGGACGTTGTTGATGCTCCGGCCTCGATAACTCATGGAATCTCCGTTCTTAGAGAATTGCTCCATGACAACGTTGTCAGGTTGCTTGAGACATGGAGCAGGGGAAATCGTATATATCTTGTTTATGAGTATCTTCCCTTTAATCTATGCTCTTACATCAGGCAACCGAGAAAGAGTAAAGGTCCAGATACAAGAAAATCATTTCTACTCATATCTATGTACTCTTGCCAGTCAGAAATTCCCCGTTATTACGGTGCCCCTGAACTCTTACTTGGGTCCCATCTGTATTCAACGGCAGCTGATATGTGGTCTGTGGGTTGTATATTTGGGGAGATGGTAACCGGACGGGCATTATTCCGTGGTAAAAGCAGAAGGCATCAATTGAAGAAGATTTTTCGCATGTTAGGTACCCCAACTGAGGATTCCTGGCCTGGCGTGACTGCATTTGAATCTATTATTTCTCTTTCTTCCTTCCCCAGATTTGAACCAGCGGACCTGTCAGAGAAGTTCTCTGGTTTGGAACCAGAAGGCCTTGATCTTCTTTCTAAAAATGTCTGTTTGACAGTCTTGGTCTCATCGGATGCATATGTAGTGGTGCATTTCTTTACTGATCTGAAAGCTCATAGGGCGCTTTTCAATAACGGCCAATTTGATTTTGCCTGGCAGCAAATGCTCGTCCTGGATCCAGCCCAAAGAATTTCAGCTAGCGATGCTATTGGTCATCCATACTTCCCACCATTTCCTCAACCACCAGAAGCGATTCAAATGCTCCACACAGAAAGTCAAGGAACAGATTCAGGGCAAGGAACGTCTGGTTCAAATTCAGGGCAAGGACCGAGCGGTTCACATTCAGGGCAAGGACCGAGCGGTTCACATTCAGGTCAAGTACCGAGCGGTTCACATTCAGGGCAAGGAACAAGCGGTAGCGGTGCAAGTTCAGGGCAAGCAACGAGTGATCATACAAGTTATTTGACTTTAGAAGTCACCATTTAA 1215 0.4568 MPLREYIEDSTESRSLLLRCLECRIGGPLCKPDLNLEEFNYKVIAMVGKGTFNNVYCCYQLNTRQTVAIKEIVVRDVVDAPASITHGISVLRELLHDNVVRLLETWSRGNRIYLVYEYLPFNLCSYIRQPRKSKGPDTRKSFLLISMYSCQSEIPRYYGAPELLLGSHLYSTAADMWSVGCIFGEMVTGRALFRGKSRRHQLKKIFRMLGTPTEDSWPGVTAFESIISLSSFPRFEPADLSEKFSGLEPEGLDLLSKNVCLTVLVSSDAYVVVHFFTDLKAHRALFNNGQFDFAWQQMLVLDPAQRISASDAIGHPYFPPFPQPPEAIQMLHTESQGTDSGQGTSGSNSGQGPSGSHSGQGPSGSHSGQVPSGSHSGQGTSGSGASSGQATSDHTSYLTLEVTI 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0352 404 SMART serkin_6 41 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0352 404 SUPERFAMILY Protein kinase-like (PK-like) 40 323 IPR011009 -
Bisa12g0352 404 Pfam Protein kinase domain 155 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0352 404 Pfam Protein kinase domain 41 129 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0352 404 PANTHER CELL DIVISION PROTEIN KINASE 40 134 - -
Bisa12g0352 404 MobiDBLite consensus disorder prediction 334 404 - -
Bisa12g0352 404 Gene3D Phosphorylase Kinase; domain 1 37 119 - -
Bisa12g0352 404 ProSiteProfiles Protein kinase domain profile. 41 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0352 404 Gene3D Transferase(Phosphotransferase) domain 1 120 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0352 Bisa-ChrBisa12 4745090 4749617 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0352 40 318 Core Cell Cycle Gene Families AT3G48750 31.193 7.33e-44 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Bisa12g0352 Pkinase 7.6e-15 CL0016