Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0348 ATGACTTGTTGTTTTCCCTTCTTATTTCATAAAACGGTTAAACCTTCAGCAATACGGGATCCTGACATTGACGAAGAAATTTCAGGCATTCACAATGTTGTTCTTTATACCTACAAAGAACTAAGAATCGCCACTGAGGATTTCAGCCCAGCCAACAAAATTGGGGAAGGTGGTTTTGGTTCTGTCTATAAGGGACGGTTGAAAGATGGAAAAATTGCTGCTATCAAAGTTCTTGCAGCTGAATCAAGACAAGGGGTGAGAGAATTCTTAACAGAGATTAACGTGATCTCAGAAATAGAGCATGAAAATTTAGTTAAGTTATACGGCTGTTGCGTGGAAGAAAATAACAGAATATTGGTCTACAATTACCTCGAGAATAACAGCCTTGCACAAACTCTTCTAGGTGGAGGTCACAGTAACATTCACTTCAACTGGCAAAAACGGTCTAGAATATGCATTGGGATTGCTCGTGGACTTGCCTTTCTTCATGAGGAAGTAAGACCGCATATTGTTCACAGAGATATAAAAGCAAGCAATATTCTCCTTGACAAAGACCTTACACCAAAGATTTCAGATTTTGGGCTTGCAAAGCTTATCCCACCAAACATGACTCATGTCAGTACACGTGTAGCAGGGACAATAGGTTATTTGGCACCAGAGTACGCGATAAGGGGGCAGCTGACACGAAAAGCTGACATTTATGGTTTCGGTGTACTCCTCATTGAGATTGTCAGTGGAAGATGTAATACAAATACACGGTTACCAGTAGGAGAACAGTACCTCCTAGAAAGGACATGGACACTTTATGAGCGAAGAGAATTGGTAGAGCTGATAGACACATCACTAAATGGTGAGTTCGATGTTGAGGAGGCTTGTAGGTTTCTGAAGATTGGCCTTGTTTGCACCCAAGATGTTCCGAAACTCCGGCCATCCATGTCTTCTGTGGTCAAGATGCTCACTGGTGAAATGGAGTTCGATGACAGTAAGATAACAAAACCAGGCATGATTTCTGATTTTATGGATCTAAAAGTTGGAGGAAAGCCAAAAAGTAATGCTGATATGAAGGCTTTATCTTCATACAATGCATCCTCTTCTTCAGACAACCAGGATACCACCATTACATCAGCTGCTTCAACTGCTGCAACTACAACTTTCACTGCACAGTATGATCGTAGCATGGTTATTGCTGGGGACCGTGTTCGAGTTCGTTCCGTTAATGGGGTTTCCGGTTTTACCCTTTTAAGTGCTGGGTTCGTTGGAACTGCTAGTGCTGGTCCGAGATATCATTTCTGTGGTGGCTGTTGCTTTTTGGAAGCTTATGCGGGAAGCAAATTGCCTTTGAATGAACTGCCTTCAAATTTCTGTGTATCTGAGAAGGCCTTGGTAATGGAGGATATAGGGTTGTTCAAACAAGGTTGGCAATGGCTTCGGTCGCAGAAGGATGCTTGCTGGCGTGCCCAAACTGCAGTGAGTTGTTGCAGAGACAAAACTGCCATGTTTATCGAGCAGCATTGGCCGATGGTGTGCAATGGCTGCTTCAGATTGGGGAGGTTACTTGGCCTATCATTGATTTATTGGAAAGACTGTTTTGTGAGGGGCTTTGAGTCGTGCATCCAGTTGGGTTCAGCAGTGCTTCTTCTCATAATGTGGTGTTGCTTTCTTAGTTTGACCTCGATGCATTGCTTGATTTATGTACTTATTAGTATGGGTGTTGCGGGAGCTGCTGTTCAATATTTGGGATATACTCCTGGCGTTTTCATTGTAGGCCTTTTTGCTATCCTTATGATGTGGATGTATGCTAATTTCTGGATAACAGGAACATTGCTTATCATTGGAGGTTATCTATTCTCCCTAAACCATGCACGCTTGGTGGTACTAATGGCGACTGTGTATGCTTTATACTGTGTCAAAGTTCGAGTGGGATGGCATGGCATTTTTCTCTCTGTAAACCTTGCATTTTTCTCCAATGACATTCTTAATTTCTTGCTCCAATGGTTTGATAATGTTAGTGAAAGCTCGCATTCTGAAGACCAGAAGCAGTCAGAAACAGTTCTGGGAGATGACTTTCCTGAAGAGTGTGAATATTCTATTCCTACTCATGAATCTGAAAATTTGCATTCATGTAAATCATCCAGTAAACCTGCTGTTACCACATCAGTTGTTGATAAACAGAAAGAGTTTTCTGCTAGCAAAGTTGTTAAAGTACAAACAGATTCAGTTGATGAAATGAGAAGGATACTGAGTAGTCTGAATCACTATGAAGCACTTGGATTTTCCCGTGACAAGAAAGTTGATGCAGCAATTTTGAAAAAGGAATACCGGAAAAAGGCAATGCTTGTTCATCCTGATAAGAACATGGGCAGTCCCCTAGCAAGTGAGTCATTTCAGAAGCTTCAATGTGCATATGAGGTTCTTTCTGATTCCACGAAGAAGAGAGACTATGATGAGCAATTGAGGAAAGAGGAAGCTAAAAGTGTCTGCCAGAAATCCCAGGACAATCCTGATTATCGTTCTGAAGAATCCAGGCGTATACAGTGCACCAAGTGTGGCAATTCACATATATGGGTATGCACTAACAGAGTTAAGGCAAAGGCAAGATGGTGCCAGGACTGCTGTCAGTATCATCAAGCCAAGGATGGAGATGGGTGGGTTGAGTACAAAGGTTCTTTGGCTTTTGACAAATCGCAAAAGATGGAGATTCCACGGGCTTTTGTTTGTGCGGAGAGCAAAATTTTTGACGTGTCAGAGTGGGCCATTTGTCAGGGAATGGCTTGTAGGCCTAACACCCATCGGCCAAGTTTCCATGTGAACATGGTTGGCTTGGAGAAAAGCCCACGTTGTAACTCAAGCCGATATCCATGGGATTTGGATGCCGAAATGATGTTGGACGAAGATGAGGAGGCATTTGAGATGTGGCTTCAGCAGGCTCTGGCCTCTGGTCTCTTTTGCGAGACCTCCAAACGCAGGAAGAGCTGGAGCCCATTCAAATTGCATCAGAAGAAAGGAAAGAAGCAGTGGCGAAGAACATCATGCTGA 3036 0.4289 MTCCFPFLFHKTVKPSAIRDPDIDEEISGIHNVVLYTYKELRIATEDFSPANKIGEGGFGSVYKGRLKDGKIAAIKVLAAESRQGVREFLTEINVISEIEHENLVKLYGCCVEENNRILVYNYLENNSLAQTLLGGGHSNIHFNWQKRSRICIGIARGLAFLHEEVRPHIVHRDIKASNILLDKDLTPKISDFGLAKLIPPNMTHVSTRVAGTIGYLAPEYAIRGQLTRKADIYGFGVLLIEIVSGRCNTNTRLPVGEQYLLERTWTLYERRELVELIDTSLNGEFDVEEACRFLKIGLVCTQDVPKLRPSMSSVVKMLTGEMEFDDSKITKPGMISDFMDLKVGGKPKSNADMKALSSYNASSSSDNQDTTITSAASTAATTTFTAQYDRSMVIAGDRVRVRSVNGVSGFTLLSAGFVGTASAGPRYHFCGGCCFLEAYAGSKLPLNELPSNFCVSEKALVMEDIGLFKQGWQWLRSQKDACWRAQTAVSCCRDKTAMFIEQHWPMVCNGCFRLGRLLGLSLIYWKDCFVRGFESCIQLGSAVLLLIMWCCFLSLTSMHCLIYVLISMGVAGAAVQYLGYTPGVFIVGLFAILMMWMYANFWITGTLLIIGGYLFSLNHARLVVLMATVYALYCVKVRVGWHGIFLSVNLAFFSNDILNFLLQWFDNVSESSHSEDQKQSETVLGDDFPEECEYSIPTHESENLHSCKSSSKPAVTTSVVDKQKEFSASKVVKVQTDSVDEMRRILSSLNHYEALGFSRDKKVDAAILKKEYRKKAMLVHPDKNMGSPLASESFQKLQCAYEVLSDSTKKRDYDEQLRKEEAKSVCQKSQDNPDYRSEESRRIQCTKCGNSHIWVCTNRVKAKARWCQDCCQYHQAKDGDGWVEYKGSLAFDKSQKMEIPRAFVCAESKIFDVSEWAICQGMACRPNTHRPSFHVNMVGLEKSPRCNSSRYPWDLDAEMMLDEDEEAFEMWLQQALASGLFCETSKRRKSWSPFKLHQKKGKKQWRRTSC 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0348 1011 SMART dnaj_3 750 810 IPR001623 -
Bisa12g0348 1011 ProSiteProfiles Protein kinase domain profile. 48 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0348 1011 ProSitePatterns Serine/Threonine protein kinases active-site signature. 170 182 IPR008271 GO:0004672|GO:0006468
Bisa12g0348 1011 SUPERFAMILY Protein kinase-like (PK-like) 28 319 IPR011009 -
Bisa12g0348 1011 ProSitePatterns Protein kinases ATP-binding region signature. 54 76 IPR017441 GO:0005524
Bisa12g0348 1011 SUPERFAMILY Chaperone J-domain 728 814 IPR036869 -
Bisa12g0348 1011 CDD STKc_IRAK 54 321 - -
Bisa12g0348 1011 ProSiteProfiles dnaJ domain profile. 751 818 IPR001623 -
Bisa12g0348 1011 Pfam Protein kinase domain 51 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0348 1011 ProSitePatterns Nt-dnaJ domain signature. 795 814 IPR018253 -
Bisa12g0348 1011 FunFam cold-responsive protein kinase 1 19 123 - -
Bisa12g0348 1011 SMART serkin_6 48 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0348 1011 PANTHER OS03G0832900 PROTEIN 452 1006 - -
Bisa12g0348 1011 Gene3D Transferase(Phosphotransferase) domain 1 124 333 - -
Bisa12g0348 1011 Gene3D DnaJ domain 738 840 IPR036869 -
Bisa12g0348 1011 Gene3D Phosphorylase Kinase; domain 1 18 123 - -
Bisa12g0348 1011 Pfam Cleavage inducing molecular chaperone 840 937 IPR032843 -
Bisa12g0348 1011 Pfam DnaJ domain 751 815 IPR001623 -
Bisa12g0348 1011 FunFam cold-responsive protein kinase 1 124 335 - -
Bisa12g0348 1011 PRINTS DnaJ domain signature 773 788 IPR001623 -
Bisa12g0348 1011 PRINTS DnaJ domain signature 790 810 IPR001623 -
Bisa12g0348 1011 CDD DnaJ 751 807 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0348 Bisa-ChrBisa12 4713522 4731319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0348 463 1010 Miscellaneous Gene Families AT1G16680 69.892 0.0 770
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bisa12g0348 Pkinase 9.1e-46 CL0016