Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0325 ATGGTGAAGTTCCTGAGACCCAACAAGGCGGTGATTGTCCTGCAGGGCCGTTTCGCCGGCCGGAAGGCCGTCATCGTTCGCAACTTCGACGACGGCACCCGCGACCGCCCTTACGGCCACTGCCTCGTCGCCGGCATCTCCAAGTACCCACAGAAGGTCATCCGCAAGGACTCCGCCAAGAAGACTGCCAAGAAGTCCCGCGTCAAGGCCTTCGTCAAGGTCGTTAATTACAGCCACCTCATGCCCACTCGGTACACACTCGATGTCGATCTCAAGGACGCCGTCAGCGTCGACGTGCTTCAATCGCGGGACAAGAAGGTTGCGGCGGCCAAGGAGATCAAGAAGAGATTCGAGGAGAGGTTCAAGACCGGGAAGAACAGTAGTTTACTATCTTTTCCAAAGGATTCTGATATCTGTATTGCAATTTTGCTTCACTTATTAAAATCGATGATTGCTTGTTTTGCATTATTATGTTCTGGATTTTTGCGGCATTTGATTGGTGAGTTTGACTCTGGCGGATGTTTTGAAAAGCATTATGTTCTGAGAAGATGCCTATAA 558 0.509 MVKFLRPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPQKVIRKDSAKKTAKKSRVKAFVKVVNYSHLMPTRYTLDVDLKDAVSVDVLQSRDKKVAAAKEIKKRFEERFKTGKNSSLLSFPKDSDICIAILLHLLKSMIACFALLCSGFLRHLIGEFDSGGCFEKHYVLRRCL 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0325 185 SUPERFAMILY Translation proteins SH3-like domain 3 120 IPR008991 -
Bisa12g0325 185 Pfam Ribosomal L27e protein family 52 128 IPR001141 GO:0003735|GO:0005840|GO:0006412
Bisa12g0325 185 FunFam 60S ribosomal protein L27 1 133 - -
Bisa12g0325 185 CDD KOW_RPL27 6 88 IPR041991 -
Bisa12g0325 185 Gene3D - 1 139 IPR038655 -
Bisa12g0325 185 PANTHER 60S RIBOSOMAL PROTEIN L27 1 130 IPR001141 GO:0003735|GO:0005840|GO:0006412
Bisa12g0325 185 SMART kow_9 4 31 IPR005824 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0325 Bisa-ChrBisa12 4488170 4488824 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0325 1 133 Cytoplasmic Ribosomal Protein Gene Family AT4G15000 73.684 4.41e-68 202