Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0287 ATGAAGTTTATAGATGTGGTGACATATAATATATTTGGTTTTAGGTGGTCAAAGATTGCATCTTATTTGCCTGGAAGAACAGACAATGAGATCAAGAATGTGTGGAACACCCATTTGAAGAAGAGAAAATTTCTGGAATGTTCCAGTGCTTCAGATGATCAATTATCCAAGCAGGAGTCATCCATAACTTCCTCTTCTTCATCTTCATCTTCTTCACTAAAAACACCCCAGGTTGTCCTTGATGATGATGATCACTTCAATGCACAAGGACCCCAGTTTGTGACATCAATGGCAGAGAACAACACAAATGAGCAGGACTCAGAAAATCCACCAACTTCACTCTGTTCCAGTGAATCAACACCTATCTCCAACAGTGATACGTTGGAGAAGGAGGTTGTTGAAATACCATTTGAGGCAGACCATGATTTTTGGAACTTGTTGGATGATGACAACATAGGAGGTTCCCTCCAGTCAGATGATCAAGTTCAACAGCACCAGAAACTTGTTCATCAAGATGCTGAAAGGAGGAAGTGGTTCTATGAATTGGAGAAAGAGCTTGAATTGGAACCACAGGAATTTGATATGGAGATGATGAAGACCACTGGATCTGATCCAGACATATGGAATTTGGCCTAA 636 0.4041 MKFIDVVTYNIFGFRWSKIASYLPGRTDNEIKNVWNTHLKKRKFLECSSASDDQLSKQESSITSSSSSSSSSLKTPQVVLDDDDHFNAQGPQFVTSMAENNTNEQDSENPPTSLCSSESTPISNSDTLEKEVVEIPFEADHDFWNLLDDDNIGGSLQSDDQVQQHQKLVHQDAERRKWFYELEKELELEPQEFDMEMMKTTGSDPDIWNLA 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0287 211 MobiDBLite consensus disorder prediction 55 76 - -
Bisa12g0287 211 ProSiteProfiles Myb-like domain profile. 15 39 IPR001005 -
Bisa12g0287 211 SUPERFAMILY Homeodomain-like 9 53 IPR009057 -
Bisa12g0287 211 MobiDBLite consensus disorder prediction 100 127 - -
Bisa12g0287 211 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 43 IPR017930 -
Bisa12g0287 211 Pfam Myb-like DNA-binding domain 12 39 IPR001005 -
Bisa12g0287 211 Gene3D - 4 74 - -
Bisa12g0287 211 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 10 157 - -
Bisa12g0287 211 CDD SANT 2 39 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0287 Bisa-ChrBisa12 3899768 3900403 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0287 3 189 MYB Transcription Factor Family AT1G16490 36.082 3.22e-24 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bisa12g0287 Myb_DNA-binding 2.1e-06 CL0123