Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0280 ATGGCTTCTTCTCTTCTCTCTAGGATGTTCTTGGGTCCTCGCTTCATTCATTCTTCCAGGCCCCAAATTCTCACCTCTTTCTTCAATAAGACGTCATTTTCTTCACATGCTGTCCCAGCCTATACAGCTCAAAAAACAAGAACAGCTAGTTGGGCTTCTTTTGTTATGGCTTCGTCCTCAATTGAAAGAAGAGCTTTTTATTCGACGCTGACTGTATCTACAAACGAGCCTGTTGTTTCTGTGGATTGGCTCCATGCTAATCTAAAGGAGCCTGATTTGAAGGTGCTGGATGCCTCCTGGTACATGCCAGATGAACAAAGGAACCCAATTCAAGAATATCAGGTTGCTCACATTCCTGGGGCCCTTTTCTTTGATGTAGATGGAATCTCAGATCGAACAACAAAATTGCCACACATGTTGCCATCAGAAGAAGCTTTTGCTGCTGCTGTTTCGGCTCTTGGCATAGAGAACAAAGATGGGCTGGTTGTTTATGATGGAAAAGGAATATTTAGTGCAGCTCGTGTTTGGTGGATGTTCCGAGTGTTTGGGCACGACAGAGTTTGGGTATTAGATGGTGGCCTGCCAAGATGGCGTGCATCAGGATATGATGTAGAGTCTAGTGCTTCTGGTGATTCTATATTGAAGGCTAGTGCTGCAAGTGAGGCAATAGAGAAAGTATATCATGGACAAGCAGTTGGCCCGGTCACATTTCAAACTAAATTTCAGCCACATCTTGTTTGGACCCTTGAGCAGGTAAAGAAAAATGTTGAGGAAAAAAGTCACCAACATATAGACGCTCGATCCAAGCCCAGGTTTGATGGAGCAGCACCAGAGCCCCGAAAGGGAATCAGAAGTGGTCATGTACCTGGTAGCAAGTGCATTCCTTTTGCTCAGTTGTTGGATGCTTCACAAACATTGTTACCACCAGATGAGCTTAAGAAGCGATTTGATCAAGAAGGCATCTCTCTGGAAAGCCCAGTTGTAACTTCTTGTGGCACTGGTGTAACTGCTTGCATTCTTGCATTGGGTCTGCATCGACTGGGAAACTCTGATGTTGCAGTATATGATGGATCTTGGACCGAATGGGGAGCGCAATCCAATACACCCGTTGAAACTTCATAG 1122 0.4492 MASSLLSRMFLGPRFIHSSRPQILTSFFNKTSFSSHAVPAYTAQKTRTASWASFVMASSSIERRAFYSTLTVSTNEPVVSVDWLHANLKEPDLKVLDASWYMPDEQRNPIQEYQVAHIPGALFFDVDGISDRTTKLPHMLPSEEAFAAAVSALGIENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDSILKASAASEAIEKVYHGQAVGPVTFQTKFQPHLVWTLEQVKKNVEEKSHQHIDARSKPRFDGAAPEPRKGIRSGHVPGSKCIPFAQLLDASQTLLPPDELKKRFDQEGISLESPVVTSCGTGVTACILALGLHRLGNSDVAVYDGSWTEWGAQSNTPVETS 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0280 373 FunFam Sulfurtransferase 242 373 - -
Bisa12g0280 373 SMART rhod_4 79 203 IPR001763 -
Bisa12g0280 373 SMART rhod_4 247 368 IPR001763 -
Bisa12g0280 373 MobiDBLite consensus disorder prediction 258 284 - -
Bisa12g0280 373 Gene3D - 71 212 IPR036873 -
Bisa12g0280 373 ProSiteProfiles Rhodanese domain profile. 257 371 IPR001763 -
Bisa12g0280 373 CDD TST_Repeat_1 78 201 - -
Bisa12g0280 373 ProSiteProfiles Rhodanese domain profile. 89 206 IPR001763 -
Bisa12g0280 373 MobiDBLite consensus disorder prediction 258 280 - -
Bisa12g0280 373 Pfam Rhodanese-like domain 80 199 IPR001763 -
Bisa12g0280 373 Pfam Rhodanese-like domain 249 364 IPR001763 -
Bisa12g0280 373 ProSitePatterns Rhodanese C-terminal signature. 352 362 IPR001307 GO:0004792
Bisa12g0280 373 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 76 207 IPR036873 -
Bisa12g0280 373 Gene3D - 242 371 IPR036873 -
Bisa12g0280 373 PANTHER THIOSULFATE SULFERTANSFERASE 74 372 IPR045078 GO:0016783
Bisa12g0280 373 ProSitePatterns Rhodanese signature 1. 113 124 IPR001307 GO:0004792
Bisa12g0280 373 CDD TST_Repeat_2 248 364 - -
Bisa12g0280 373 FunFam Sulfurtransferase 71 213 - -
Bisa12g0280 373 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 250 372 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0280 Bisa-ChrBisa12 3839804 3848101 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0280 56 372 Sulfurtransferasese or Rhodanese AT1G79230 79.495 0.0 553
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g0280 12 3839804 3848101 Bisa12g0280 12 3839804 3848101 ECH