Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0279 ATGAGCAATCATAATTCCTTCTTCCACGAATTGGAACCACAGTATTACTCAGATCATCATCAGGACAGTGATAACTTGTTGTTCAATCTTCCACACACCTTCTTCGATTACTCCTATGAGTCCCATCCTCATCCTCTACCCCTACCCCTCACATCATCATCATCATCGTCGTCGTCGTCGTCATCACTCTCTGATCATCACCATCCACTCCTCCCAAAACGCCAGAAGCTCTGCCTCCAACATCATCACCATCATGGTTTCTTCGTTGATGAGGCCTATGAATATAATCCCTACTATGCTTCCTTCTTCCCTGCAATAACAATGCCAGATCAGTTCGGTGATATCACTAGAGTTGCACCGCCGCCACCACTACTAGCAAGTGGTAACATTAACGAGGAGAAGAAGACGGTGACGGCGCAGAGCCGGGCGGCCCGGCAGCGGAGGAAGAAGATAGCGGAGAAGACGGAGGAGCTGGGGAAGTTGGTGCCCGGAGGGACTAAAATGAACACTGCTCAGATGCTTCTTGCTGCTTCCAAGTATGTCAAGTTCTTGCAAGCTCAACTCACCATGCTCAACCTCATCAACTCACTTCAGGAGAAGAAGGCATCAAGTTTAAGTGAAGATCTGGAGGCACTGCTTGGGTGCCCCATGGTGGAAGAGAAGCTCTACTCTGAGGAAATGTGCTTTGTTCCAAAAGACTTCGTCATCACTCTCACTAATCATCAAGATCTCCAATCAACCCCTTCCCTTCTCAATAATCTTAATCACTTGATTAACCACAAAAAATTACTAGATCCAAATGCACTAAACAAGATGCAAGCATGA 825 0.4679 MSNHNSFFHELEPQYYSDHHQDSDNLLFNLPHTFFDYSYESHPHPLPLPLTSSSSSSSSSSSLSDHHHPLLPKRQKLCLQHHHHHGFFVDEAYEYNPYYASFFPAITMPDQFGDITRVAPPPPLLASGNINEEKKTVTAQSRAARQRRKKIAEKTEELGKLVPGGTKMNTAQMLLAASKYVKFLQAQLTMLNLINSLQEKKASSLSEDLEALLGCPMVEEKLYSEEMCFVPKDFVITLTNHQDLQSTPSLLNNLNHLINHKKLLDPNALNKMQA 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0279 274 MobiDBLite consensus disorder prediction 48 66 - -
Bisa12g0279 274 SMART finulus 141 190 IPR011598 GO:0046983
Bisa12g0279 274 Gene3D - 132 209 IPR036638 GO:0046983
Bisa12g0279 274 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 133 197 IPR036638 GO:0046983
Bisa12g0279 274 CDD bHLH_AtbHLH_like 140 191 IPR045239 -
Bisa12g0279 274 Pfam Helix-loop-helix DNA-binding domain 141 185 IPR011598 GO:0046983
Bisa12g0279 274 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 30 229 IPR045843 GO:0003700|GO:0006355
Bisa12g0279 274 MobiDBLite consensus disorder prediction 48 68 - -
Bisa12g0279 274 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 135 184 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0279 Bisa-ChrBisa12 3835499 3838464 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0279 131 270 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G30670 42.553 2.00e-27 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa12g0279 HLH 4.5e-06 No_clan