Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0276 ATGGAACCTACATACGAGGAATTCCAGCCTGCATCACAGTCAGTAATGCAGGACCATCTGGATGGCATGCATGCTAGTAGGAGACCATCTGACCCAAATACATCAGAAGTTAAACCTGTTCTTAATTACTCCATACAGACTGGTGAGGAATTTGCCCTTGAATTTATGCGAGATAGGGTGAATCTCAGGAAGCCTGTATCTTCAAATGTTGGTGATGCCAATTATACAATAGGTCATATTGGTCATGCAGGACCTGAAAGTGGATCAGATATTTCTATGCGAGAAATGGTTGACAGGGGTCCAAAAGAGTATGATGGAAAGAACACATTATTACATGGGGGCAGATACAATTATGGGTCAATTCGATCAATGCCAAGAACTTCATATAATCAAGAGAATGGTCGGTTTGTGTATGGGTATGCCTCTTCTGGAAGCTCTGATAACTCATCAGTGACAATGAAAGTTCTTTGCAGCTTTGGTGGCAGAATATTGCCACGACCTAGTGATGGAAAACTTAGGTATGTTGGAGGTGAAACACGTATTATCCGTATAAGAAAGGACATATCTTGGCAAGAGCTTATGCAGAAAACATTGTTAATATATAATCAGACTCATGTAATCAAGTATCAGCTTCCTGGGGAAGATCTTGATGCTTTGGTTTCTGTGTCATCTGATGAGGATTTGCAGAATATGATGGAGGAATGTAATCATCTAGAAGATAGAGAAAGATCACAAAAGCTTAGGATTTTCTTGTTCTCATTGAGTGATTTGGAGGATGCTCAATTTGGTCTTGGTAGCATGGGTGATGATTCCGAGGTCCAGTTTGTTGTTGCTGTTAATGGCATGGACTTGGGTTCAAGAAACAACTCAGCACTTCTTGGTGTGTCCTCCTCAGCAAATGACATGCATGAATTGGACAGGAAAAATATTGAGAAGGAAGCTAGTAGAGTTCCTGTAGAATCTATAGGTGTCAGTAATGCTCTTCTGACTGGCAGATTTGACTCATCATTGACTATGCAGTCTTCACAATCAGTGCCTCCAACTTCCTCAAATGCTTATGAAACCTATCCAATGATTTATAGTGATCAGATGATGCATCTTGGGGAAACTTTCAGTCAATATCCTGTTTACCATGGCCTTAATCCCTCCCAAAACTTTACTCTCATAGAGACTCCTAATAATGTGCCACCTCATGGGCTGATAAATCAACCAGGGATTTTGAACGAAGGTCCTTCACCCAATGGATTACAATTACAGAATTCTGAAATACCAGCAATGCAGGTTAAAAATATGGGTGATAGTGGAGTTCCACAAGGAAGTGACCCGGGGAAAGTTTTATCCTTGGAGACACCATCTCCTGTTCCCACACAACCAAAAGATGGTTTCTTGAAAAATAATTTTCCTAAAGCACCAGTTGCAGTTAACATACCAGATGGGCTTCTGCCTTCATTGCCATCAATGACAAAGGAGCAGCACCAGGAGTATGAAGAGGTATCTTCCAATTCTAGCAGTCCATTTGGACCTGCTTATGTTGATTCTCAGTCCAATGGGATTGATTTGAGTTGTCTTCACCCTCCTCCAATTCCTAAAAGAGTTTACTATTCCTATTCAGAAAGAACTCCCAAGGAGCAAGTAGAGTTGCTGAATCGGTCTGCAAAGTCAGATGATACGTATGATTCTCAGTTTCCTGTATCAGATTTACTTTCTGATATCAACCCACAGTATTCAGTTAAAGAATCTGGTGACAACTTGCGAGATGGAAATTTGTCTAATCTAACAGATGAAATGAGTACTACATCAAAGCCTCTGCATGCAGATGGCCACACCATTGATAACGGGTTTGCCGAACTCAAGATGTACAAACCGATGCCTGAGACAAGCAGTCAGATGAATTCAAAGCTCTCAGAACATGTAGATCCAGAATTGAAGCAGGTATTATTACCAAACTATGAAGGAAGTAAAGTTGTGGTAAATGAGGAGCCGGTCATAGGGTTGGAGACTGATAGTTACTGTAAAGATAACCGCAGCAAGCCTCTACTTGATGAAAACAAAGACTGTGAATCAGATTTTCCTGCATTGGACCAGGTTCCCTCTTTTAAGCAACATGATGATCCAGTCTCCCATCTTCCAGAGATTAATTGGGGTGATGCCTCGGGGAAGGAGTCCAACAATGATCATATGGTGCAAGAGGTACCAGTTTCTTTAGCGGAGAACACAACTGAAGACATTTCGCAAGGTATTCCCTCAAATTCTGTTGCTAAACAAGCACAAGGTGACAACATTCTTATTGATATTGATGAACGATTTCCCCTTCAATTGCTTTCTGATATGTATACTCAAGCAAAACTTGCAGAAGACCCTTCCAGTCTACATCCACTAAATACTAATGGAGTAGGCTTAAGCATAAACATGGAAAATCACGAACCTAAACGATGGTCATATTTTCAGAAGTTGGCACAAGAAGGGCTAGATAACATGTCTCTTATCGACCAGGATCCTCTTGTTTTTTCACCTCCACCTGGAAATGCAGGAGATAATAAATCTCACCTTGTTACACCAACTGATGGAGTTTCTGTAGACCATGCAGATTCACACACAAACCATTTTGGTGATGAAAATAGAAAGGGTTTTGATGGAATGGTTGGAACCGAAACCACTGTTCTGCAATCAAATTATGATCATTCTCAAGTGAAGGAGACTGAAAGTATGCAGTTTGAGGCTATGATGGAAAACTTAGGAGCACAAGATTCAGAGTATGAGGATGGGAAGTTTGAAACAAGAAATAGTGGTCTACCTCCACTTGATCCTTCTCTGGGAGATTTTGATATCAGCACCTTGCAGGTCATAAAGAACGAAGATCTTGAAGAGCTGAGAGAACTGGGTTCTGGTACTTTTGGAACTGTGTATCATGGAAAATGGCGGGGAACAGATGTTGCCATTAAAAGAATAAAGAAAAGCTGTTTCACTGGTAGATCATCTGAACAAGAAAGACTGATTGTAGAGTTCTGGCGGGAAGCTGGCATACTTTCCAAGCTTCATCATCCAAATGTGGTGGCATTTTATGGGGTGGTCCAGCATGGACCAGGAGGAACAATGGCCACTGTTGCAGAGTACATGGTGGATGGTTCTCTTAGGCATGTATTACTTCGCAAGGATAGGTATCTTGATCGTCGCAAGAGGCTGATAATTGCCATGGATGCAGCTTTTGGAATGGAATATTTGCACTCAAAAAATATAGTGCATTTTGACTTGAAATGCGACAATTTGCTTGTGAACTTGAAAGACCCTTTAAGGCCTATATGCAAGGTTGGTGACTTTGGCTTGTCTAAAATTAAACGGAATACATTGGTTTCTGGGGGTGTGCGGGGGACCCTACCTTGGATGGCACCAGAGCTGCTGAATGGAAGCAGTAACAAGGTCTCAGAAAAGGTTGATGTTTTCTCCTTTGGCATAGTATTATGGGAGATTCTAACTGGTGAGGAGCCATATGCCAATATGCACTATGGTGCAATCATAGGTGGGATTGTAAATAACACATTAAGGCCAACAATCCCAAGTTGTTGTGATGCTGAATGGAGGACACTAATGGAGCAATGTTGGTCGCCCAATCCTGCAGCCAGGCCATCCTTCACAGAAATAGCCAGTTGCTTAAGGGTTATGTCTACAGCTGCAAGCCAAACCAAAGCACAGGGCAACAAGGCAGCTAAATGA 3711 0.4166 MEPTYEEFQPASQSVMQDHLDGMHASRRPSDPNTSEVKPVLNYSIQTGEEFALEFMRDRVNLRKPVSSNVGDANYTIGHIGHAGPESGSDISMREMVDRGPKEYDGKNTLLHGGRYNYGSIRSMPRTSYNQENGRFVYGYASSGSSDNSSVTMKVLCSFGGRILPRPSDGKLRYVGGETRIIRIRKDISWQELMQKTLLIYNQTHVIKYQLPGEDLDALVSVSSDEDLQNMMEECNHLEDRERSQKLRIFLFSLSDLEDAQFGLGSMGDDSEVQFVVAVNGMDLGSRNNSALLGVSSSANDMHELDRKNIEKEASRVPVESIGVSNALLTGRFDSSLTMQSSQSVPPTSSNAYETYPMIYSDQMMHLGETFSQYPVYHGLNPSQNFTLIETPNNVPPHGLINQPGILNEGPSPNGLQLQNSEIPAMQVKNMGDSGVPQGSDPGKVLSLETPSPVPTQPKDGFLKNNFPKAPVAVNIPDGLLPSLPSMTKEQHQEYEEVSSNSSSPFGPAYVDSQSNGIDLSCLHPPPIPKRVYYSYSERTPKEQVELLNRSAKSDDTYDSQFPVSDLLSDINPQYSVKESGDNLRDGNLSNLTDEMSTTSKPLHADGHTIDNGFAELKMYKPMPETSSQMNSKLSEHVDPELKQVLLPNYEGSKVVVNEEPVIGLETDSYCKDNRSKPLLDENKDCESDFPALDQVPSFKQHDDPVSHLPEINWGDASGKESNNDHMVQEVPVSLAENTTEDISQGIPSNSVAKQAQGDNILIDIDERFPLQLLSDMYTQAKLAEDPSSLHPLNTNGVGLSINMENHEPKRWSYFQKLAQEGLDNMSLIDQDPLVFSPPPGNAGDNKSHLVTPTDGVSVDHADSHTNHFGDENRKGFDGMVGTETTVLQSNYDHSQVKETESMQFEAMMENLGAQDSEYEDGKFETRNSGLPPLDPSLGDFDISTLQVIKNEDLEELRELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLIVEFWREAGILSKLHHPNVVAFYGVVQHGPGGTMATVAEYMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPSCCDAEWRTLMEQCWSPNPAARPSFTEIASCLRVMSTAASQTKAQGNKAAK 1236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0276 1236 Pfam PB1 domain 169 253 IPR000270 GO:0005515
Bisa12g0276 1236 ProSitePatterns Protein kinases ATP-binding region signature. 960 985 IPR017441 GO:0005524
Bisa12g0276 1236 SUPERFAMILY Protein kinase-like (PK-like) 945 1217 IPR011009 -
Bisa12g0276 1236 SMART serkin_6 954 1220 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0276 1236 PANTHER SERINE-THREONINE PROTEIN KINASE 197 1217 - -
Bisa12g0276 1236 Gene3D - 171 253 - -
Bisa12g0276 1236 PRINTS Tyrosine kinase catalytic domain signature 1188 1210 IPR001245 GO:0004672|GO:0006468
Bisa12g0276 1236 PRINTS Tyrosine kinase catalytic domain signature 1073 1091 IPR001245 GO:0004672|GO:0006468
Bisa12g0276 1236 PRINTS Tyrosine kinase catalytic domain signature 1036 1049 IPR001245 GO:0004672|GO:0006468
Bisa12g0276 1236 PRINTS Tyrosine kinase catalytic domain signature 1144 1166 IPR001245 GO:0004672|GO:0006468
Bisa12g0276 1236 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1042 1234 - -
Bisa12g0276 1236 SUPERFAMILY CAD & PB1 domains 168 257 - -
Bisa12g0276 1236 CDD PB1_UP2 156 252 - -
Bisa12g0276 1236 Gene3D Transferase(Phosphotransferase) domain 1 1042 1236 - -
Bisa12g0276 1236 Gene3D Phosphorylase Kinase; domain 1 947 1041 - -
Bisa12g0276 1236 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 947 1041 - -
Bisa12g0276 1236 ProSiteProfiles Protein kinase domain profile. 954 1220 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0276 1236 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1079 1091 IPR008271 GO:0004672|GO:0006468
Bisa12g0276 1236 CDD STKc_MAP3K-like 960 1213 - -
Bisa12g0276 1236 Pfam Protein tyrosine and serine/threonine kinase 955 1217 IPR001245 GO:0004672|GO:0006468
Bisa12g0276 1236 MobiDBLite consensus disorder prediction 429 461 - -
Bisa12g0276 1236 MobiDBLite consensus disorder prediction 488 509 - -
Bisa12g0276 1236 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 172 254 - -
Bisa12g0276 1236 SMART PB1_new 167 254 IPR000270 GO:0005515
Bisa12g0276 1236 Coils Coil 228 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0276 Bisa-ChrBisa12 3801838 3809613 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0276 32 597 MAP Kinase Kinase Kinase AT1G16270 41.390 5.35e-98 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Bisa12g0276 PK_Tyr_Ser-Thr 1.9e-61 CL0016