Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0275 ATGGTGACCCAAATTAGAGCGTCAGTGGAGCTTATTTTGTTGCTATTTTCAAAGATTTCATACTTGAATGATGCTATGATGGAGCAACCCAGAATGCAGAAACAACATCAGTACAATACCCAAGATCCTAGAAATGAGGAATTCCATCCTGCACTACAGCCAATTGTGCAGGACCATCTGGATGGCATGCATATTAATACAAGACCTGCTGACTGTTATATACCAGAAAAGAAACCTGTACTTAATTACTCCATTCAGACTGGTGAAGAATTTGCTCTGGAATTTATGCGAGATAGAGTGAATCTCAGGCAGCCTGTCTTTCCAAATATCATGGGGGATTCCAATTATGCAACAGGTTATATGGAACTGAAAGGCATTTTAGGTATTAGTCATTCAGGATCTGAAAGTGGGTCAGATATTAATATGCTCCCAAAAGTTGAGAAAGGTCCAAATGAATTTGACAGAAGAAGCTCTTCCTTGCACCGGGACAGAAGTAATTATGGGTCAGTTCGGTCAATACCTAGAACTTCATCACATCAAGACAATAACCGAGTCCTTCATGGTCTTGCCTCTTCTGGAGCTACTAGTAACTCATCGATGAAGATGAAGGTTCTTTGCAGCTTTGGTGGTAGAATATTACCACGGCCCAGTGACGGAAAGCTTAGATATGTTGGAGGTGAAACACGTATTATTTGTATCAGAAAGGACATAACTTGGCAGGAGCTTATGCAGAAAATCTTGTCTGTCTATAATGAGACTCATGTTATAAAGTATCAGCTTCCCGGAGAAGATCTCGATGCCTTGGTTTCAGTATCTTGTGATGAGGATCTGAGGAATATGATGGAGGAATGCCATGATCTAGAAAACAGAGAAGGATCACAAAAGCTTAGGATGTTTCTGTTTTCCATCCATGATTTGGAAGATCCTAGTGTTGATGGTGATACTGAAGTCCAGTATGTAGTTGCTGTTAATGGCATGGACTTGGGATCAAGGAACTATTCGACCCTTCATGTTGCAAGCACTTCTGCAGATAATATACATGAATTGGATGGACAAAATATTGAGAGGGAGGCTCATAGAGTTCCAGTAGAATCAACTGGTATCGCTAGTTCTTCCTTGACTGCCAATGTTGACTCATCATTAGGAATTCAGTCTTCGCAACCAATGCTTCCAACTTCCTCAAATGCATATGAAAGCAGTTTTTATGGTAGCCAGCATGGGGATACCATTCAATATCCAGCACACCATGGCTTGGATCCTTCTACTAACAACTCAGCTCTCAGACAGATTCCAGTTCCTGTGCCCACACATGGTCTTATCAATCAAGGAATTATCAATGAAGGGTATCCACCAAATGAGTTGCAATTCCAAAATTCTGAAATGTCAGCTATGCAGGTAAAGAAAAGGGGCGATAGTTTCATCAAGCATGAAACTGAACCTGGAAAGGGATTCCCCTTGGAAACACCATATCCCGTCCCTTCACAGCCATTTGATGGCAATTTACAAGGTAATTTTTCTGAAGCAGTTACAGATGCTGTACCTGGGGGGCATCAACCTAAATTGTCTTCAAAAAACAAGGGCAAGCACCAACATTACGAAGAAGCCTCTTCAATGGTTAATGCAATTAATTTAACACAGATTCCAAAATCTGGCGAAGATGACCTTTATTCTATCTCTACTAATGCTTTCAGTCCTTATGTTGATGTTGAGTCCAATGTGATGGATTTGAGCTGCCTTGAACCACCTCCACTTCCCAACAGAGTCTATTATTCAGAGAGAATTCCAAGGGAGCAGGAAGATTTGCTGAACCGATCCACAAAGTCAGATGATGCACATGGCTCTCATTTGCTTATGTCAGATTTACTATCTGACTTCAACCAGCAGAATTCAGCTACAGGATCCAGTGATAAATTTCAGTTACAGTCAAATTCAACTGCGGTGTCAAGCATGACAGCAAAACCTTTGCTTGTAAATGGCCATGCCATTGACGATGGGCTTGCCCAGCTACAAAACTACAAACAGTTGCCTGATGCAGCAAGTATGAAGAATTCAAAACTATTACAGCCTGTGGATTCTGAGTTGAAGCCAGCAGTAGCAAACAATACAGATAATAAAGTTGCTGCAAATGAAGATCGGGTCCTTAGGTCTGAAAACGAAATTAATTCCTCCAAAGATAACCATAACAATCGCCTAGTTGATGAAACCAACAGCACTGAACATCCTGCTTTTCGCAAGGTTCCGTCTGTTGAGCATAATGAGAACCTGGCATCTAATCTTCCAGACCTTAATTTGGGTGTGGCTTCTACCAAGCAATCTGGTAATGATGCTAAGATCCAACCACAGCCCTATCCTTTGGCTGGGAACACAAGACAAGATGTTTCTCCAGATTTTCCTTCAGATTCTGTTCCTACACCATCTCCGGGTGATATTCTGATTGATATTGATGACAGGTTTCCCCGTGATTTCCTTTATAATATGTTCTCCACCGCCATACACTCTGAAGATTCCTCACACATTGGTCCAGTACCAACAGATAGAACAGGCTTGAGTTTAAACGTGGAAAATCATGAGCCCAAACGTTGGTCATATTTTCAGAAGTTGGCAAATGAAGGGTTAGATAATGTGTCTCTAATAGATCAGGATCATGGTTTTTCTTCTGCTTTAAGAAAAGTGCAAGAAGGAGATAGTAGATCTCAGCAAGTTGCACCCCTACAGGCTGATGGAGTTTCATCTGGTCATATTGAATCTGGCCTCAATCTTGGTGAAGAAAATCAGAAACACTTACCTGTAACAAGTAGAACAGAGGCCACCATTCTGCACCCAAACTATGATCATATCCAAGACAAGGAGACTCAAAACAAGAACTTGGATCCTGTAAAGGAAAACATAAGACTGAAAGAGTCTGAGTATGAAGATGGCAAGAATGAAACGAGGGATATGGGGTGTTACCCACAAGATCCTTCTTTGGGGGAATTTGACATCAGTACTTTGCAGCTCATAAATAACGAAGATCTTGAAGAGTTGAAAGAATTGGGATCAGGTACCTTTGGGACTGTGTACCATGGGAAGTGGCGGGGATCAGATGTTGCCATTAAAAGAATAAAGAAAAGCTGCTTCACTGGCCGATCTTCAGAACAAGAGAGACTGACTGTTGAGTTCTGGCGGGAAGCTGACATACTTTCCAAGCTTCATCACCCAAATGTGGTGGCATTTTATGGTGTGGTGAAGGATGGACCAGGAGGAACATTAGCCACCGTTACAGAGTTCATGGTGGATGGTTCTCTAAGGCATGTTTTGCTTCGCAAGGATAGGTATCTAGATCGCCGCAAGAGGCTGATAATTGCCATGGATGCAGCTTTTGGAATGGAGTATTTGCACGCAAAAAATATTGTGCATTTTGACTTGAAATGTGACAATTTGCTTGTGAACTTAAAGGATCCTTTACGGCCAATATGCAAGGTTGGTGATTTTGGCCTGTCAAAGATTAAACGAAATACCCTGGTCTCTGGTGGTGTGCGTGGAACCCTACCTTGGATGGCACCAGAGCTTTTGAATGGAAGCAGCAATAAGGTCTCAGAAAAGGTCGATGTGTTCTCTTTTGGCATTGTGTTATGGGAGATTCTGACTGGTGAGGAGCCATATGCTAATATGCACTATGGTGCAATAATTGGAGGTATTGTAAATAACACATTGAGGCCAACAATCCCTGGTAATTGTGATGCCGATTGGCGAACACTAATGGAGCAGTGTTGGGCACCTAATCCTGCAGCCAGGCCATCCTTCACAGAAATTGCTCGCCGCTTACGCGTGATGTCTGCAGCTGCTAGTCAAACCAAAGGGCAGGGCTACAAGGCATCTAAATGA 3864 0.4221 MVTQIRASVELILLLFSKISYLNDAMMEQPRMQKQHQYNTQDPRNEEFHPALQPIVQDHLDGMHINTRPADCYIPEKKPVLNYSIQTGEEFALEFMRDRVNLRQPVFPNIMGDSNYATGYMELKGILGISHSGSESGSDINMLPKVEKGPNEFDRRSSSLHRDRSNYGSVRSIPRTSSHQDNNRVLHGLASSGATSNSSMKMKVLCSFGGRILPRPSDGKLRYVGGETRIICIRKDITWQELMQKILSVYNETHVIKYQLPGEDLDALVSVSCDEDLRNMMEECHDLENREGSQKLRMFLFSIHDLEDPSVDGDTEVQYVVAVNGMDLGSRNYSTLHVASTSADNIHELDGQNIEREAHRVPVESTGIASSSLTANVDSSLGIQSSQPMLPTSSNAYESSFYGSQHGDTIQYPAHHGLDPSTNNSALRQIPVPVPTHGLINQGIINEGYPPNELQFQNSEMSAMQVKKRGDSFIKHETEPGKGFPLETPYPVPSQPFDGNLQGNFSEAVTDAVPGGHQPKLSSKNKGKHQHYEEASSMVNAINLTQIPKSGEDDLYSISTNAFSPYVDVESNVMDLSCLEPPPLPNRVYYSERIPREQEDLLNRSTKSDDAHGSHLLMSDLLSDFNQQNSATGSSDKFQLQSNSTAVSSMTAKPLLVNGHAIDDGLAQLQNYKQLPDAASMKNSKLLQPVDSELKPAVANNTDNKVAANEDRVLRSENEINSSKDNHNNRLVDETNSTEHPAFRKVPSVEHNENLASNLPDLNLGVASTKQSGNDAKIQPQPYPLAGNTRQDVSPDFPSDSVPTPSPGDILIDIDDRFPRDFLYNMFSTAIHSEDSSHIGPVPTDRTGLSLNVENHEPKRWSYFQKLANEGLDNVSLIDQDHGFSSALRKVQEGDSRSQQVAPLQADGVSSGHIESGLNLGEENQKHLPVTSRTEATILHPNYDHIQDKETQNKNLDPVKENIRLKESEYEDGKNETRDMGCYPQDPSLGEFDISTLQLINNEDLEELKELGSGTFGTVYHGKWRGSDVAIKRIKKSCFTGRSSEQERLTVEFWREADILSKLHHPNVVAFYGVVKDGPGGTLATVTEFMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHAKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPGNCDADWRTLMEQCWAPNPAARPSFTEIARRLRVMSAAASQTKGQGYKASK 1287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0275 1287 CDD STKc_MAP3K-like 1011 1268 - -
Bisa12g0275 1287 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1093 1285 - -
Bisa12g0275 1287 SUPERFAMILY CAD & PB1 domains 217 306 - -
Bisa12g0275 1287 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1130 1142 IPR008271 GO:0004672|GO:0006468
Bisa12g0275 1287 CDD PB1_UP2 205 301 - -
Bisa12g0275 1287 Gene3D Transferase(Phosphotransferase) domain 1 1093 1286 - -
Bisa12g0275 1287 MobiDBLite consensus disorder prediction 767 799 - -
Bisa12g0275 1287 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 998 1092 - -
Bisa12g0275 1287 ProSiteProfiles Protein kinase domain profile. 1005 1270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0275 1287 SMART PB1_new 216 303 IPR000270 GO:0005515
Bisa12g0275 1287 MobiDBLite consensus disorder prediction 767 806 - -
Bisa12g0275 1287 SUPERFAMILY Protein kinase-like (PK-like) 996 1267 IPR011009 -
Bisa12g0275 1287 MobiDBLite consensus disorder prediction 716 740 - -
Bisa12g0275 1287 Gene3D - 220 303 - -
Bisa12g0275 1287 Pfam PB1 domain 218 301 IPR000270 GO:0005515
Bisa12g0275 1287 MobiDBLite consensus disorder prediction 143 184 - -
Bisa12g0275 1287 PANTHER SERINE-THREONINE PROTEIN KINASE 246 1269 - -
Bisa12g0275 1287 MobiDBLite consensus disorder prediction 163 184 - -
Bisa12g0275 1287 Pfam Protein tyrosine and serine/threonine kinase 1006 1268 IPR001245 GO:0004672|GO:0006468
Bisa12g0275 1287 Gene3D Phosphorylase Kinase; domain 1 998 1092 - -
Bisa12g0275 1287 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 221 303 - -
Bisa12g0275 1287 PRINTS Tyrosine kinase catalytic domain signature 1124 1142 IPR001245 GO:0004672|GO:0006468
Bisa12g0275 1287 PRINTS Tyrosine kinase catalytic domain signature 1239 1261 IPR001245 GO:0004672|GO:0006468
Bisa12g0275 1287 PRINTS Tyrosine kinase catalytic domain signature 1087 1100 IPR001245 GO:0004672|GO:0006468
Bisa12g0275 1287 PRINTS Tyrosine kinase catalytic domain signature 1195 1217 IPR001245 GO:0004672|GO:0006468
Bisa12g0275 1287 MobiDBLite consensus disorder prediction 148 162 - -
Bisa12g0275 1287 ProSitePatterns Protein kinases ATP-binding region signature. 1011 1036 IPR017441 GO:0005524
Bisa12g0275 1287 SMART serkin_6 1005 1271 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0275 Bisa-ChrBisa12 3791153 3797632 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0275 57 631 MAP Kinase Kinase Kinase AT1G16270 39.778 2.56e-104 356
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Bisa12g0275 PK_Tyr_Ser-Thr 1.7e-61 CL0016