Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0273 ATGGATCAATCAGAGCAGACGCAACAGCAACAACAGCAGCAGCAGCAACAACAACAACAACAACAGCATGTGGTTGGAGTTACAGCAGGCACAGGCCAAATGGCCTATTCTACTCATTACCAGACTGCTCCCATGGTGGCTTCTGGTACCCCTGCTGTAGCCGTACCTTCCCCAACACATCCTCCGGCCCCCTTCTCAAATTCTCCTCACCAACTTGCCTATCAGCAAGCGCAGCACTTCCACCATCAACAGCAGCAGCAGCAACAACAGCAGCTTCAGATTTTTTGGGCTAACCAAATGCAAGAAATTGAGCAAACAACTGACTTCAAGAACCATAGTCTCCCACTTGCTCGGATAAAAAAAATAATGAAAGCTGATGAGGATGTACGGATGATTTCAGCAGAGGCCCCGGTCATATTTGCAAAAGCATGCGAAATGTTCATCTTGGAGTTGACTCTGCGTTCTTGGATCCATACAGAAGAAAACAAGAGGAGAACACTACAGAAGAATGATATAGCTGCAGCTATTTCAAGAACTGACGTTTTTGATTTCTTGGTTGACATTATCCCCAGAGATGAGCTGAAAGAAGAGGCACTTGGAGTAACAAAAGCTACTATCCCAGTAGTGGGTTCCCCAGCTGATATGCCATATTATTATGTCCCACCACAACATCCCGTAGGACCAACTGGAATGATAATGGGAAAACCAGTTGACCAAGCAGCGCTTTACGGTTCCCAGCAGCCTCGACCTCCTATGGCTTTCATGCAGTGGCCACAGACACAAGCTCAGCAACAGCCACCAACTGAACAGCAGCAAACAGACACTTGA 828 0.471 MDQSEQTQQQQQQQQQQQQQQQHVVGVTAGTGQMAYSTHYQTAPMVASGTPAVAVPSPTHPPAPFSNSPHQLAYQQAQHFHHQQQQQQQQQLQIFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEALGVTKATIPVVGSPADMPYYYVPPQHPVGPTGMIMGKPVDQAALYGSQQPRPPMAFMQWPQTQAQQQPPTEQQQTDT 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0273 275 Pfam Core histone H2A/H2B/H3/H4 68 176 IPR007125 GO:0003677
Bisa12g0273 275 MobiDBLite consensus disorder prediction 1 20 - -
Bisa12g0273 275 SUPERFAMILY Histone-fold 71 185 IPR009072 GO:0046982
Bisa12g0273 275 Coils Coil 1 21 - -
Bisa12g0273 275 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 54 259 - -
Bisa12g0273 275 MobiDBLite consensus disorder prediction 252 275 - -
Bisa12g0273 275 FunFam Nuclear transcription factor Y subunit gamma 79 191 - -
Bisa12g0273 275 Gene3D Histone, subunit A 74 191 IPR009072 GO:0046982
Bisa12g0273 275 MobiDBLite consensus disorder prediction 242 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0273 Bisa-ChrBisa12 3768295 3769122 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0273 92 220 CCAAT-HAP5 Transcription Factor Family AT1G56170 91.538 2.35e-83 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Bisa12g0273 Histone 4.3e-18 CL0012