Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0257 ATGAGGGCATTGAGAGGCCCAAAACATGGGAGAATTCTGACACACAAGTTGAAAACGGTGTTGAAGCATTTTGAGGTTACTTCATCTTTAGATTTAGATTCTTCAAATGTAGAGCCTTACAGTGTCAGCTCATCATCTCCTTTGCCACCTTATGAATGTTTATATCCTCCAAATCCTCCTTCTACAGGCCTTCCAGCCCAAAGCCCTCCTGGATCTCTGCCCACACCAACAACGCAGAGTGTACCAGGCCCACCCATAATTCTAAATCCTCCTATTACTATTGTTCCAGGCCCACCAGGGTCCTCACCGAGCCCGTCAAGCAATGTCCCGGGCTCACCCGAACCAGTGCAAAATCCTCCTATCATTATCCCAGGCCCACCAGGGTCTACCACGAGCCCACCAAGCACTAACCCGTCCCCAGGCTCACCTGATCTACAAAATCCTCCTATTATTCTTCCAGGCCCACCCGGGCCCACAACGAGCCCACCAAGTACTGTTCCATCCCCTACTGTAGGCAGTGCCCCTGGCTCACCCGATACACAAAACCCTCCTATCATTCTTCCAGGCCCATCTGGGCCCACAACAGGCCCATCATCCCCTACCGGAGGTACAGTCCCAAGCCCAACGGTGTTCGAGCCTCCGGTTGTGTTTCCACCACCAAGCGTGCCTCCACCTCCGAATCGCGTTGCCCCAAGTGGAGCCCTGTGGTGTGTGGCTAAGCCATCAGTCCCAGACCCAATCATTGAAGAAGCCATGAACTATGCCTGTGGGTCCGGAGCAGACTGTGATCCTCTCCAGCCGAATGGGCCTTGTTTTCAGCCCGACACTATATTTGCACATGCTTCTTATGCCTTCAATAGTTATTGGCAAAATACAAAGGTTGGTGGAGGTACCTGTGACTTTGGAGGAACAGGCATGCTAGTTTCTGTTGACCCTAGCTACGATGGATGCCACTTTGTCTACAATTGA 969 0.5191 MRALRGPKHGRILTHKLKTVLKHFEVTSSLDLDSSNVEPYSVSSSSPLPPYECLYPPNPPSTGLPAQSPPGSLPTPTTQSVPGPPIILNPPITIVPGPPGSSPSPSSNVPGSPEPVQNPPIIIPGPPGSTTSPPSTNPSPGSPDLQNPPIILPGPPGPTTSPPSTVPSPTVGSAPGSPDTQNPPIILPGPSGPTTGPSSPTGGTVPSPTVFEPPVVFPPPSVPPPPNRVAPSGALWCVAKPSVPDPIIEEAMNYACGSGADCDPLQPNGPCFQPDTIFAHASYAFNSYWQNTKVGGGTCDFGGTGMLVSVDPSYDGCHFVYN 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0257 322 PRINTS Proline rich extensin signature 145 162 - -
Bisa12g0257 322 PRINTS Proline rich extensin signature 127 143 - -
Bisa12g0257 322 PRINTS Proline rich extensin signature 99 120 - -
Bisa12g0257 322 PRINTS Proline rich extensin signature 87 99 - -
Bisa12g0257 322 PRINTS Proline rich extensin signature 62 78 - -
Bisa12g0257 322 MobiDBLite consensus disorder prediction 33 48 - -
Bisa12g0257 322 MobiDBLite consensus disorder prediction 50 169 - -
Bisa12g0257 322 MobiDBLite consensus disorder prediction 33 212 - -
Bisa12g0257 322 Pfam X8 domain 235 306 IPR012946 -
Bisa12g0257 322 MobiDBLite consensus disorder prediction 181 195 - -
Bisa12g0257 322 FunFam Glucan endo-1,3-beta-glucosidase 4 230 322 - -
Bisa12g0257 322 Gene3D - 231 320 - -
Bisa12g0257 322 PANTHER BETA-1,3 GLUCANASE 233 319 IPR044788 -
Bisa12g0257 322 SMART X8_cls 235 319 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0257 Bisa-ChrBisa12 3594387 3595612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0257 229 319 Glycoside Hydrolase AT4G26830 46.739 1.04e-23 99.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g0257 12 3594387 3595612 Bisa12g0257 12 3594387 3595612 ECH