Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0235 ATGGAAAGAATGTTCCCTCCAAAGAAGCCCTCAAGTATGAATGCCCACGAGAGAGGGATGTGCGTCCAAGGAGACTCAGGTCTTGTCCTCACCACCGACCCTAAGCCTCGTCTTCGTTGGACCGTCGAGCTCCATGAACGCTTCGTCGATGCTGTCACTCAGCTTGGAGGCCCTGATAAGGCCACTCCTAAAACCATCATGAGGGTTATGGGTGTGAAGGGTCTCACCCTTTACCACCTCAAGAGCCACCTTCAGAAATTTAGGCTTGGGAAGCAACCCCACAAGGAATTCAATGATCACTCGATCAAGGACGGTATGAGAGCTTCGGCTTTAGAGCTTCAGCGAAACACTGCCTCCTCATCCGCCATGATTGGTCGCAACATGAACGATAACTCACACATGGTTGTTGCGATTAGGATGCAAATGGAGGTGCAGAGAAGACTGCATGAACAACTAGAGGTTCAAAAACACCTTCAACTGAGGATCGAAGCCCAAGGGAAGTACATGCAGAGTATATTAGAAAAAGCCTATGAAACCCTTGCAGGTGAAAACATGGCTAAGGCCAATAATAATATTAACATTGGACCACATCAGGCCATCCCTGAAATAGGAGGAGGAGGACTCATCAAAGACTTTAGTTCTCCTCTTAGTTTTCCTTTTCAAGAACTCAACATTTACGGTGGAGGAGGAGGCGGCGGCGGCGGTGACCAACTTGATCACCATCTTCACGCCTTGGAGAGGCCACCACTTGAAGGACTAATCATTCCGAATAATAACACCAACAATAACGATAACGATAATTTGTGTCTTGGGAAGAAGAGGCCTAATCCTTATAACACTAACGCTAGCACTGGGAAGAACCCTTTGATTTGGAGCGACGATCTTCGTCTTCATCAAGACTTAGGGTCTGCCTCGTCGTGCCTTGGAGGGCCTCAAGATGATCCTTTCAAAGGCCATGAGCAGCAGCTTCATATTGCGCCGCCAATGTTGGACCACCGAGGCGGCGGCGAGATGGACCCCATGTCGGAGATTTACGACACGAAGCCGCCGGTGCTACAAGGAGAAGCCGTGTGTGAGAAGAAGTTTCCAGATGCTTCGGTGAAGCTTGAAAGGCCATCACCAAGAAGGGCACCTAATAGTACTATTCATGGAGAGAGGATGAGCCCCATGATTAACAGTACTGGGACTATGGCACAAGGAAGAAGCTCACCATTTGGGTGA 1221 0.4906 MERMFPPKKPSSMNAHERGMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDGMRASALELQRNTASSSAMIGRNMNDNSHMVVAIRMQMEVQRRLHEQLEVQKHLQLRIEAQGKYMQSILEKAYETLAGENMAKANNNINIGPHQAIPEIGGGGLIKDFSSPLSFPFQELNIYGGGGGGGGGDQLDHHLHALERPPLEGLIIPNNNTNNNDNDNLCLGKKRPNPYNTNASTGKNPLIWSDDLRLHQDLGSASSCLGGPQDDPFKGHEQQLHIAPPMLDHRGGGEMDPMSEIYDTKPPVLQGEAVCEKKFPDASVKLERPSPRRAPNSTIHGERMSPMINSTGTMAQGRSSPFG 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0235 406 SUPERFAMILY Homeodomain-like 34 90 IPR009057 -
Bisa12g0235 406 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 15 186 IPR044848 GO:0003700
Bisa12g0235 406 Pfam Myb-like DNA-binding domain 38 86 IPR001005 -
Bisa12g0235 406 MobiDBLite consensus disorder prediction 385 406 - -
Bisa12g0235 406 FunFam Myb family transcription factor 34 92 - -
Bisa12g0235 406 Gene3D - 34 92 - -
Bisa12g0235 406 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 92 IPR017930 -
Bisa12g0235 406 MobiDBLite consensus disorder prediction 363 406 - -
Bisa12g0235 406 Pfam MYB-CC type transfactor, LHEQLE motif 137 178 IPR025756 -
Bisa12g0235 406 NCBIfam myb-like DNA-binding domain, SHAQKYF class 35 90 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0235 Bisa-ChrBisa12 2951040 2953325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0235 4 406 G2-like Transcription Factor Family AT1G79430 54.893 1.98e-123 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bisa12g0235 Myb_DNA-binding 2.3e-06 CL0123