Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0226 ATGGGGCATCGTTGCTGCAGCAAACAGAAGATCAAAAGAGGTTTGTGGTCTCCTGAAGAAGATGACAAACTCATCCAATTTATCACCACTCATGGCCATAAAAGTTGGAGCTCTGTCCCAAAACTTGCAGGGTTGCAGAGGTGTGGAAAGAGTTGCAGACTGAGATGGATAAATTACTTGAGACCTGACCTTAAGAGGGGTTCCTTCACTGCAGAAGAAGAACAGACCATCATCGATGTTCACAGAATTTTGGGAAACAGGTGGGCTCAGATAGCGAAGCACCTCCCAGGAAGAACAGACAACGAGGTGAAGAACTTCTGGAACTCCTGCATTAAGAAGAAGCTCATCTCTCAAGGCTTCGACCCTCAGACTCACAATCTCCTCTCTTCTCATAAAACCAGAAGGTTAACACCCTCTAATTCATCCGCATATCATCATAATAATGACAACAGTAATTCCAATAGTTCCATTTTCAAACTAGCTCAACCACCCACCAATGACACTATTTTCTCCTTCGACCATCAACTTCAGCCCTCCGCCATCCATGTCCCTAATAATGATCATCAGTCTCATGGATTCTCTGATTTCCCCTATCCCCCACCCAACAACATTATTTCCTCTTCTTCGTCTTCTTCTTCCTGCTTGGTCAATAGTTACCCGTCTTCATCAGCCATTGGGTTGTCTCAGAACGAGAATAACAGAATCTGGGTCTCTCATGCTGTTCATGATGCTCAAACTCTGTTAACGGACGGAGGAGTTGAAGAACGATTAGAACAAGAGAAGACCTGTGACAAGGGAATTATCGAGCAAGTCGCGAGAAATCCCCTGCTCAGGAATTGTAAGAGAATATGCATGCAAAAAATTGCTTGGATCGATGAAGGAAAAATTGATAGATCGGATTTCGTGTTTTTGTGGAATTGCTTTCGATCAGAACTTATAGATACTCTAGCATTTGTAGCTACATATGCGTATGCGTATGTAGGATTTATTTTCAAGTTCTGA 1002 0.4301 MGHRCCSKQKIKRGLWSPEEDDKLIQFITTHGHKSWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGSFTAEEEQTIIDVHRILGNRWAQIAKHLPGRTDNEVKNFWNSCIKKKLISQGFDPQTHNLLSSHKTRRLTPSNSSAYHHNNDNSNSNSSIFKLAQPPTNDTIFSFDHQLQPSAIHVPNNDHQSHGFSDFPYPPPNNIISSSSSSSSCLVNSYPSSSAIGLSQNENNRIWVSHAVHDAQTLLTDGGVEERLEQEKTCDKGIIEQVARNPLLRNCKRICMQKIAWIDEGKIDRSDFVFLWNCFRSELIDTLAFVATYAYAYVGFIFKF 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0226 333 CDD SANT 68 108 IPR001005 -
Bisa12g0226 333 FunFam MYB transcription factor 5 66 - -
Bisa12g0226 333 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Bisa12g0226 333 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Bisa12g0226 333 MobiDBLite consensus disorder prediction 132 160 - -
Bisa12g0226 333 SUPERFAMILY Homeodomain-like 10 107 IPR009057 -
Bisa12g0226 333 Gene3D - 67 146 - -
Bisa12g0226 333 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Bisa12g0226 333 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Bisa12g0226 333 Pfam Myb-like DNA-binding domain 66 109 IPR001005 -
Bisa12g0226 333 CDD SANT 16 60 IPR001005 -
Bisa12g0226 333 PANTHER MYB DOMAIN PROTEIN 55 1 217 - -
Bisa12g0226 333 FunFam Transcription factor MYB86 67 143 - -
Bisa12g0226 333 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
Bisa12g0226 333 Gene3D - 10 66 - -
Bisa12g0226 333 SMART sant 12 62 IPR001005 -
Bisa12g0226 333 SMART sant 65 113 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0226 Bisa-ChrBisa12 2817484 2819813 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0226 1 201 MYB Transcription Factor Family AT3G12720 60.563 1.19e-85 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa12g0226 Myb_DNA-binding 1.8e-14 CL0123