Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0225 ATGGCTCCAATGAGTCTCCCTCCTGGGTTTAGGTTCCACCCAACAGATGAAGAACTTGTTGCCTACTACTTGGAAAGAAAAATCACAGGCCGTTCCATAGAGCTTGAAATTATCCCTGAAGTTGATCTCTACAAATGTGAACCGTGGGACTTACCAGACAAGTCGTTCTTGCCAAGCAAGGATATGGAGTGGTACTTCTACAGTCCGAGAGATAGGAAGTATCCAAATGGGTCAAGAACGAACAGAGCAACGAGAGCTGGGTACTGGAAAGCCACAGGAAAAGATAGGGCAGTTCACTCTCAGAAGCGACAAGTAGGGATGAAGAAGACTTTGGTTTATTACAGAGGAAGAGCCCCACATGGAATCAGAACCAACTGGGTCATGCATGAGTATCGCCTTACCGAATCACTCCCTCCTTCTACTTCTTCCTCCTTCAAGGATTCCTATTCATTGTGTCGTGTTTTCCGGAAGACACTTCAAATCCCAAAGCCTAAAGAAGATCAAGAAGAAGAATTACAAACTGAAAATATTGCAAAGAAGGGATCTAAGTCTAACATGTGGGTCTCGGAAGAACAAGGTTTAAGGGAGGATTCAAGTGGCATTGAGATATCCAGAGAAATGGAAACTGCAGAAGATCAGAAAGTGATTGTGAATCATGATGGTGACCAATATCCTAATAATAAATTTCCTTGTGACAATGCTTCTTCTTCAGATCTCACCCAAGGGACACCCACTGATCAAACTGGAATAGCAGATAATGACTTTCAAGCCCATCTTGCCTCTGATGAAGCAAACAGTGCAGCTAATCCCTACTCTCTTGGCTTGGACTATTCATCAAATCTATTTCAGGAGATGGAGCTACAAATGTATGGAGGCGTGCATTACCAACTTCCATACCCACCATTGGAGCTTGAAGATTTCCCTCAAATAAACTTAACAGAGACAGAGACAAAGGCAATGAAGACTGAACAAATGGTGAACGATTGCATGGTATATAGGGACTGTACTGCAATGAGTGGAACCCTAGAAGAGATCATCTCTTTGTGTTCCTCTAAGGATAATAACTCTTTGCCTCTCTCAATGCTAGGTTGA 1092 0.4295 MAPMSLPPGFRFHPTDEELVAYYLERKITGRSIELEIIPEVDLYKCEPWDLPDKSFLPSKDMEWYFYSPRDRKYPNGSRTNRATRAGYWKATGKDRAVHSQKRQVGMKKTLVYYRGRAPHGIRTNWVMHEYRLTESLPPSTSSSFKDSYSLCRVFRKTLQIPKPKEDQEEELQTENIAKKGSKSNMWVSEEQGLREDSSGIEISREMETAEDQKVIVNHDGDQYPNNKFPCDNASSSDLTQGTPTDQTGIADNDFQAHLASDEANSAANPYSLGLDYSSNLFQEMELQMYGGVHYQLPYPPLELEDFPQINLTETETKAMKTEQMVNDCMVYRDCTAMSGTLEEIISLCSSKDNNSLPLSMLG 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0225 363 MobiDBLite consensus disorder prediction 221 244 - -
Bisa12g0225 363 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Bisa12g0225 363 MobiDBLite consensus disorder prediction 228 244 - -
Bisa12g0225 363 MobiDBLite consensus disorder prediction 178 192 - -
Bisa12g0225 363 MobiDBLite consensus disorder prediction 166 198 - -
Bisa12g0225 363 Gene3D NAC domain 15 160 IPR036093 GO:0003677|GO:0006355
Bisa12g0225 363 ProSiteProfiles NAC domain profile. 6 157 IPR003441 GO:0003677|GO:0006355
Bisa12g0225 363 SUPERFAMILY NAC domain 3 157 IPR036093 GO:0003677|GO:0006355
Bisa12g0225 363 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 232 - -
Bisa12g0225 363 FunFam Nac domain-containing protein 86 15 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0225 Bisa-ChrBisa12 2810399 2814470 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0225 1 347 NAC Transcription Factor Family AT1G54330 51.567 4.36e-105 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bisa12g0225 NAM 6.1e-40 No_clan