Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0211 ATGTACAACCTTGTTCTCACTTGGATCATGGATATCGGCCTTTTGTTTCCTTTTCGTCTCAATGTCATTAGTACGCATAAAAACCCTATAAGTCCTTCATTTCGCGGCCTCGTTATACAGCAAACTGAGCGTTCTACGCCTCAAAGCTTCAGAGTTGAGAGCTGTATCGGAGCTATGGCCGCCACCACCAACACCACCGCCGCGCCTCCGCGCCAGCTGTCCCAAAAAGAGGCTGACATCCAGATGATGTTGGCCGCAGAGGTTCACCTTGGAACCAAAAATTGTAACTTCCAAATGGAGCGATATGTCTTCAAGCGCCGCAACGACGGTATTTATATAATCAACCTTGGCAAGACATGGGAGAAGCTTCAGCTTGCTGCCAGGGTTATCGTTGCCATTGAGAACCCTCAGGATATTATAGTTCAGTCTGCCAGGCCTTATGGGCAGAGAGCAGTTCTTAAGTTTGCTCAATACACTGGTGCCCATGCCCTTGCTGGAAGACACACTCCAGGAACATTCACTAACCAGCTCCAGACATCATATAGTGAGCCTCGCCTTCTCATTCTAACTGATCCAAGAACTGATCACCAGCCCATTAAGGAAGCCGCACTTGGAAATATACCAACTATTGCTTTCTGTGACACTGATTCTCCCATGCGGTATGTTGACATTGGTATTCCTGCCAATAATAAGGGGAAGCACAGCATAGGTTGTCTCTTCTGGCTATTAGCAAGGATGGTACTGCAGATGCGGGGTACTATTCGTCCAGGGCTTAAGTGGGATGTGATGGTGGATCTATTCTTCTACAGAGAACCTGAGGAGACCAAACAACAAGAGGAGGAAGAAGTACCTGCTGCCCCAGAGTATGCTATTACGGACTTCAATGCTGCAAGCATTGCCGCTGACGGGCAGTGGCCTGCTGCTATTGATCAGACCTGGACTGATACAGTTCCGCAGCCTATTCCTGCAGCTCCTGGTGTCAACTGGGCGGCAGATGCAGCAGGAGAATGGGGTGAATCTGCTCCACCTCCAGCAGCAGTTCCTGTCCCTCAAATCCCTGCCCCCGGCACTGAGTCTGTGGCTGCTACTGGCTGGGATCTTTGA 1104 0.4991 MYNLVLTWIMDIGLLFPFRLNVISTHKNPISPSFRGLVIQQTERSTPQSFRVESCIGAMAATTNTTAAPPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHALAGRHTPGTFTNQLQTSYSEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGLKWDVMVDLFFYREPEETKQQEEEEVPAAPEYAITDFNAASIAADGQWPAAIDQTWTDTVPQPIPAAPGVNWAADAAGEWGESAPPPAAVPVPQIPAPGTESVAATGWDL 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0211 367 CDD RPS2 83 249 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bisa12g0211 367 PANTHER 40S RIBOSOMAL PROTEIN SA 70 361 IPR005707 GO:0003735|GO:0006412|GO:0015935
Bisa12g0211 367 NCBIfam 30S ribosomal protein S2 75 271 IPR005707 GO:0003735|GO:0006412|GO:0015935
Bisa12g0211 367 SUPERFAMILY Ribosomal protein S2 75 265 IPR023591 -
Bisa12g0211 367 ProSitePatterns Ribosomal protein S2 signature 2. 184 208 IPR018130 GO:0003735|GO:0005840|GO:0006412
Bisa12g0211 367 PRINTS Ribosomal protein S2 signature 222 236 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bisa12g0211 367 PRINTS Ribosomal protein S2 signature 184 201 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bisa12g0211 367 PRINTS Ribosomal protein S2 signature 80 98 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bisa12g0211 367 PRINTS Ribosomal protein S2 signature 159 176 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bisa12g0211 367 PRINTS Ribosomal protein S2 signature 201 212 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bisa12g0211 367 PRINTS Ribosomal protein S2 signature 110 119 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bisa12g0211 367 FunFam 40S ribosomal protein SA 79 285 - -
Bisa12g0211 367 ProSitePatterns Ribosomal protein S2 signature 1. 80 91 IPR018130 GO:0003735|GO:0005840|GO:0006412
Bisa12g0211 367 Gene3D - 79 284 - -
Bisa12g0211 367 Hamap 40S ribosomal protein SA [rps-0]. 67 308 IPR027498 GO:0003735|GO:0006412|GO:0015935
Bisa12g0211 367 Pfam Ribosomal protein S2 83 178 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bisa12g0211 367 Pfam Ribosomal protein S2 181 247 IPR001865 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0211 Bisa-ChrBisa12 2567261 2570350 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0211 64 346 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 74.035 6.57e-152 427