Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0210 ATGTCGAGGAAACCGAATATTACTCGGAGACTAACAAAATGCAGAGAAAACCAAGCAAACATCGAAATGCTGAAGAAGCCGAATACTAAACCCGAGGAAACCGAAACAAATGATATTCCTCTTGAGGGGTGTTGTTGTCTTGTTGTGGCGTCAAACCCTGTTAAGAAGCCCTACTTATTTGAGGTGAACCACAATTTGTCAAAAGAACCTTTCAAAACAGATCATACTGCTCGTAACAATGCCAATTCAGCAATTTCTTCACCAAATCATTCCAAATTGGTAACTAAAGCAGCAAAAGATGGCAAATCAACTGAATATTTAACAAGTAATCTATCTTCTAAACCTCAGAAACTAGAAGGCAAGTTTGTTTCTGGTCCATCCCCCTCAGCAGGGAATTCATGGGCATTGCCGACACATGCAAAAACGAACAATTATGGCCAAGGAAGTGCCAGTAGCTCTCATAGTAACAGTTTAGATAGCACCAGTGCACCCATTAAGCCACATACAGGTGGTGATGTACGATGGGATTCAATTCAAATGGTTTCCAGAGGCAACCCTCTTAATCTTGGCCATTTTCGGCTTCTTAAGCTCATTGGATGTGGAGACATTATTAGTGTATATCTCGTGGAACTTAGAGGAACTAAGTCCCACTTTGCCATGAAAGTAATGGACAAGGCATCCTCAGGGAGCAAAAATAAGCTATTGAGAACACAGACAGAAAGGGAGATTCTTGGACTTCTTGACCATCCATTCTTGCCCACTTTATATTCCTACTTTGAAAGTGATAAGTTCTACTGTTTGGTCATGGAGTTCTGTAGTGGAGGCAATCTTCATTCTCTTAGACAGAGGCAGCCTAACAAGCATTTTACTGAAGGAGCTGCAAGGTTTTATGCTACAGAAGTTTTGTTAGCTCTAGAGTACCTGCACATGCTAGGCATTGTGTACAGAGACTTGAAGCCAGAGAATGTCCTTGTCAGAGACGAAGGCCATATCATGCTATCAGACTTTGATTTATCGCTTCGCTGCTCCGTCATTCCAACACTCGTCAAGTCTTCATCTACCCACGTAAGCAATGGTGGTTCTGGTTCTGGTTCTGGGAGCATTGTGGAGGATGAGCATGCAGTGCAGAGGCGCATTCAGCCATCCACTTTCTTCCCGCGCATTTTACCCTCAAAGAAGACCCGTAAATCAAAACCAGATTCTGGCCTCATGGTCGGAGCTCCCCTGCCTGAGTTGATGGCGGAGCCAACAAACGTGAGGTCCATGTCATTTGTAGGGACGCCTGAATATCTTGCTCCTGAGATTATAAAAGGAAAGGGCCATGGCAGTGCAGTAGATTGGTGGACATTTGGGATCTTCCTGTATGAGCTGTTGCATGGCGCAACTCCCTTCAGGGGTGCAGAACATCGTGCCACGTTCTTCAATATCGTAGGCCAGCCATTGATGTTCCCAGATTCTCCCCATGTCAGTCGTGTGGCTCGTGATCTCATAAAACGATTGTTGGTGAAGGAACCTAACAACAGGATTGCATGCATAAGAGGAGCAACAGAAATAAATCAGCACCCCTTTTTCCAGGGAGTGAACTGGGCTCTAGTAAGAACTGCCTTGCCTCCCCACATACCAGACCCTGTAGATTTTACCCAGTTTGCTGTCCCAAAAGACAAGAGGATGACAGATATAAATGACAAAAACACCAATAGTTTCGACTCTTCGTACGTAGATTTCTAG 1728 0.4433 MSRKPNITRRLTKCRENQANIEMLKKPNTKPEETETNDIPLEGCCCLVVASNPVKKPYLFEVNHNLSKEPFKTDHTARNNANSAISSPNHSKLVTKAAKDGKSTEYLTSNLSSKPQKLEGKFVSGPSPSAGNSWALPTHAKTNNYGQGSASSSHSNSLDSTSAPIKPHTGGDVRWDSIQMVSRGNPLNLGHFRLLKLIGCGDIISVYLVELRGTKSHFAMKVMDKASSGSKNKLLRTQTEREILGLLDHPFLPTLYSYFESDKFYCLVMEFCSGGNLHSLRQRQPNKHFTEGAARFYATEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVIPTLVKSSSTHVSNGGSGSGSGSIVEDEHAVQRRIQPSTFFPRILPSKKTRKSKPDSGLMVGAPLPELMAEPTNVRSMSFVGTPEYLAPEIIKGKGHGSAVDWWTFGIFLYELLHGATPFRGAEHRATFFNIVGQPLMFPDSPHVSRVARDLIKRLLVKEPNNRIACIRGATEINQHPFFQGVNWALVRTALPPHIPDPVDFTQFAVPKDKRMTDINDKNTNSFDSSYVDF 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0210 575 ProSiteProfiles Protein kinase domain profile. 192 524 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0210 575 MobiDBLite consensus disorder prediction 353 372 - -
Bisa12g0210 575 Gene3D Transferase(Phosphotransferase) domain 1 276 343 - -
Bisa12g0210 575 FunFam serine/threonine-protein kinase D6PK-like 419 542 - -
Bisa12g0210 575 SUPERFAMILY Protein kinase-like (PK-like) 181 551 IPR011009 -
Bisa12g0210 575 Gene3D Transferase(Phosphotransferase) domain 1 419 542 - -
Bisa12g0210 575 MobiDBLite consensus disorder prediction 71 102 - -
Bisa12g0210 575 MobiDBLite consensus disorder prediction 76 93 - -
Bisa12g0210 575 MobiDBLite consensus disorder prediction 126 164 - -
Bisa12g0210 575 CDD STKc_phototropin_like 191 545 - -
Bisa12g0210 575 Gene3D Phosphorylase Kinase; domain 1 190 275 - -
Bisa12g0210 575 SMART serkin_6 192 524 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0210 575 Pfam Protein kinase domain 193 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0210 575 Pfam Protein kinase domain 421 524 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0210 575 PANTHER FLIPPASE KINASE 1-RELATED 79 548 - -
Bisa12g0210 575 MobiDBLite consensus disorder prediction 117 170 - -
Bisa12g0210 575 FunFam serine/threonine-protein kinase D6PK-like 276 343 - -
Bisa12g0210 575 ProSitePatterns Serine/Threonine protein kinases active-site signature. 313 325 IPR008271 GO:0004672|GO:0006468
Bisa12g0210 575 ProSiteProfiles AGC-kinase C-terminal domain profile. 525 575 IPR000961 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0210 Bisa-ChrBisa12 2555596 2564965 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0210 158 566 AGC Kinase Gene Family AT1G79250 70.913 0.0 602
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Bisa12g0210 Pkinase 2.9e-35 CL0016