Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0206 ATGATGCAAGGAAGTGCACAAATAACAGTGCCTCCAGGGTTCAGATTTCACCCTACTGATGAGGAGCTTCTTTACTATTACCTGAGGAAGAAAGTCTCCTATGAAGCCATTGACCTTGATGTCATTCGAGAAGTTGATCTGAACAAACTCGAGCCTTGGGACCTCAAAGAAAAATGCAGGATTGGATCTGGGCCTCAGAACGAGTGGTACTTCTTCAGTCACAAAGACAAGAAATACCCGACAGGGACACGAACGAATCGGGCAACAACAGCTGGATTCTGGAAAGCAACAGGGAGAGACAAAGCCATATACCTCAGCAACTCCAAGAGGATTGGGATGAGGAAAACCCTAGTCTTCTACACTGGCCGTGCTCCTCACGGCCAGAAGACAGACTGGATCATGCATGAGTATCGCCTTGATGAAGATGATTCTGAAGTTCAGGAAGATGGGTGGGTGGTGTGCAGGGTGTTCAAGAAGAAGAACCTGAGTAGAGGATTCCAAGCAGAAATAATGGAAGAAGAGCAGCAGCTAATGAGCCAGATGAGATCAACCAGTGGTTCTAATTGCCTGCAGGTACTGGAACCATCAAAACACCACTTGCACCATCATCATCATCACCATCATCATATTCAAGCCCTTCATGACTATAATAATACCACCACTACCTTTGATGGCTCCATGCACCTACCCCAGTTGTTCAGTCCTGAGTCAAGCATCAACCCCATGGACGTCCTGGACTGCTCTCATCACAACTTGCTTAGGCTCACAACAACACCACCAACAACAACAAATCTCATGCAGCAGCAACAACAGCAGCCACAACAGCAACAAGGTGATCATCATCACAGAATGGGTGGAGACTGGTCATTCTTGGACAAGCTTCTTGCCTCACAACAACAGCAACAATCAGTGGTGGGTGCAGTTGGTGCTTCTGCTGCTCCTTCAACCCACAAATTCCCATTCCATTACCTTGCTTGTGATCAGAGTGATATCATGAAGTTCTCCAAGTAG 1011 0.4688 MMQGSAQITVPPGFRFHPTDEELLYYYLRKKVSYEAIDLDVIREVDLNKLEPWDLKEKCRIGSGPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYLSNSKRIGMRKTLVFYTGRAPHGQKTDWIMHEYRLDEDDSEVQEDGWVVCRVFKKKNLSRGFQAEIMEEEQQLMSQMRSTSGSNCLQVLEPSKHHLHHHHHHHHHIQALHDYNNTTTTFDGSMHLPQLFSPESSINPMDVLDCSHHNLLRLTTTPPTTTNLMQQQQQQPQQQQGDHHHRMGGDWSFLDKLLASQQQQQSVVGAVGASAAPSTHKFPFHYLACDQSDIMKFSK 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0206 336 FunFam NAC domain-containing protein 19 163 - -
Bisa12g0206 336 Pfam No apical meristem (NAM) protein 11 139 IPR003441 GO:0003677|GO:0006355
Bisa12g0206 336 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 267 - -
Bisa12g0206 336 MobiDBLite consensus disorder prediction 259 286 - -
Bisa12g0206 336 SUPERFAMILY NAC domain 6 159 IPR036093 GO:0003677|GO:0006355
Bisa12g0206 336 Gene3D NAC domain 19 163 IPR036093 GO:0003677|GO:0006355
Bisa12g0206 336 ProSiteProfiles NAC domain profile. 10 159 IPR003441 GO:0003677|GO:0006355
Bisa12g0206 336 MobiDBLite consensus disorder prediction 259 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0206 Bisa-ChrBisa12 2506987 2509179 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0206 2 336 NAC Transcription Factor Family AT1G79580 51.918 6.86e-120 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bisa12g0206 NAM 3.5e-38 No_clan