LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa12g0205	ATGTCAGCATCTACCGTGGAATCACCAAAAGAAGAATCGCTACCTCCTTTAGCTTTTGTGTCTTACCACCCTGGCATTTCCTCTTCTTTTGTACTCCCTTTTCTCCTTCCCTTTTTCTCTGCTTTCTTTCTTTCTTCTCTTCCATTGATACAACCCACCACCTTTCTTTCCTACACCGACTCTCTCATCTTCATCAGCTCGCCACTCTCAGTCTCTGAAATAGGGACTCCCGTGAACATCATCGTTGGATCACATGTCTGGGTTGAGGATCCTGAGATAGCTTGGATTGATGGTGAAGTCACAGACATCAAAGGCAGCGATGCCACTATCGTTACTACAAATGGCAAAACTATTGTGGCAGATGTTTCTGGTATATATCCTAAAGATACAGAGGCACCCCCAGTAGGGGTTGATGACATGACCAAGTTAGCATATCTTCATGAGCCAGGAGTCCTGCATAACCTTGCATGCCGTTTTGCTCTCAATGAGATATATACATATACAGGGAATATTTTAATAGCAGTAAATCCTTTCCGGAGACTGCCACACTTGTATGACATCCACATGATGGAGCAGTATAAAGGAGCAGCATTTGGAGAGCTCAGCCCTCACCTTTTTGCTGTTGCAGACACTTGTTATAGGGCAATGATAAATGAACATGGAAGCCAGTCCATTTTGGTAAGTGGAGAGAGTGGAGCTGGAAAAACAGAGACAACAAAAATGCTAATGAGATATCTAGCTTTCATGGGAGGAAGATCTAATACAGAAGGAAGAACAGTAGAGCAACAGGTTTTGGAGTCCAATCCAGTGTTGGAAGCATTTGGGAATGCCAAAACTGTCAAAAATAATAATTCAAGTCGTTTTGGTAAATTTGTTGAAATCCAATTTGACAAGAATGGGAAGATTTCTGGAGCTGCAATCCGTACATATCTCCTTGAAAGGTCGCGAGTTTGCCAAGTTTCTGACCCAGAGAGAAACTATCATTGCTTTTACATGCTTTGTGCAGCACCACCAGAGGATGTAAAAAAGTACAAGTTAGGGGACCCTAGGCAATTTCACTATCTTAATCAATCAAACTGCTATGAAGTAGCAAATGTGGATGATGCAAAAGAATACTTGGAGACCAGAAATGCCATGGATATTGTAGGAATCAGCCAGGATGAGCAGGATGCTATTTTTCGTGTGGTAGCTGCAATCCTCCATCTTGGAAACATTGACTTCATCAAAGGGAAGGAAGTTGATTCTTCCAAATTAAAAGATGAGAAATCAGTCTTCCATCTTCACACTGCTGCAGAGCTTTTGATGTGTAATGAGAAATCATTAGAAGACTCACTTTGCAAGCGTGTCATAGTTACTCCTGATGGTAAAATCACAAAACCACTAGACCCGGGCTCCGCTGCTTTGAATCGAGATGCTTTGGCAAAGACTGTCTACTCCAGGCTGTTTGATTGGATTCTGGACAAGATAAACAGTTCAATTGGTCAAGATCCCAATGCAACAAGCTTGATAGGAGTCCTTGACATTTATGGGTTTGAAAGCTTCAAAATCAACAGTTTTGAGCAACTATGTATCAACCTAACAAATGAGAAGTTGCAACAACATTTTAACCAGCATGTATTTAAGATGGAGCAAGAAGAGTACACAAAGGAGGAAATTAATTGGAGCTATGTAGAATTTGTGGATAATCAAGATGTTCTGGATCTTATAGAAAAGAAACCCGGCGGAATAATTGCTCTTCTTGATGAAGCCTGCATGTTCCCCAAGTCAACCCATGAGACATTTGCACAAAAACTGTATCAGATATACAAATCACACAAGCGCTTCAGCAAGCCAAAACTTGCTCGAACAGATTTCACGATTAACCATTACGCCGGAGATGTCACATACCAAGCAGATTATTTTCTTGATAAAAATAAGGATTATGTTGTGGCAGAGCATCAAGCTCTTTTAAATGCCTCCAAGTGCTCCTTTGTTGCTAATCTTTTCCCTCCATTACCTGAGGAGACATCAAAGCAATCAAAATTCTCTTCCATCGGTACACGGTTCAAGCAACAATTACAGTCTCTGATGGAGACATTGAACACAACAGAACCACATTACATCAGATGTGTGAAGCCAAATACAGTTTTGCAGCCTGGAATATTTGAGAACTTCAATGTCCTAAACCAGTTGAGATGTGGGGGAGTACTTGAGGCAATTAGGATTAGCTGTGCTGGATATCCAACAAAAAGAACATTTGATGAATTCCTTGATCGTTTTGGAATGCTAGCTCCTGATGTCCTTGATGGATCTGAGGAGAAAACAGCATGTATTGCAATATGTGATAAGATGGGATTAAAAGGCTATCAAATGGGAAAATCAAAGGTATTTCTCAGAGCTGGTCAGATGGCTGAATTAGATGCACGAAGAGCCGAAGTCTTGGCTAAGGCAGCTAAATGCATACAGAGACAAATCCGAACACATTTGACCAGAAAAGAGTTCATCACTTTGAGAAAGGCCACAATTTATATCCAAAAATCATGGAGAGCAAAACTTGCACGTAAGCTTTATGAGCAAATGAGGAGAGAAGCAGCTTCTATCCGCATACAGAAACATGCACGTTCACATGCAGCAAAAATGCATTATAAATCATTGCAAGCATCAGCAATAGTTATTCAGTCAGGGTTAAGAGCAATGGCAGCTCGAAATGAATTCAGGTTCAGACAAAGAACGAAGGCTGCAACCAAAGCTCAGACACAATGGCGAAGAGTCCAAGCTTTTTCTGCTTACAAACGGCTGAAGAAAGCAACTATTACATTGCAATGTCTCTGGAGAGCCAAAGTAGCTAGGAAAGAGCTCAGAAAGCTACGGATGGATGCAAGGGAAACTGGGGCACTTAAAGAGGCAAAGGATAAGTTGGAGAAGCGTGTTGAAGAACTTACATGGAGGCTAGAATTTGAAAAACACTTGAGGATTGACCTTGAAGAAGCAAAGGGGCAAGAAATTGCGAAGTTACAGAGTGCTTTACAAGAAATGCAAGGTCAGCTAGATGAAGCCCATGAGGCAATTATGCATGAGAGAGAAGCAGCAAAACTTGCAATTGAATCAGCACCACCAGTCATCAAAGAGGTACCAGTGGTGGACAACACCAAGCTAGAGCTGATGACAAATAAAAATGTGGAACTAGAGAGTGAAGTAGAAGAGTTGAAGAAGAAGATTGAGGAATTTGAGGAAAGGTATTCAGAAGTAGAGAAAGAGAATCAAGCAAGGCTGAAGGAGGCAGAAGAAGCACAGCTCAAAGCAACACAACTTCAGGAGACTATTGAAAGATTAGAATCAAACGTTTCCAACCTTGAGTCTGAGAATCAAATTCTACGTCAGCAGGCTTTGGTTGAGTCGAAAAATGAGGAACTCACTGAAGAGCTCAAAACCCTCAAGGACCAGATTGCAAATCTACAATCAGAGAATGAATTTATCCGGAACCAGGCGGCAGCAGCTGCTGTGGAGCAGAAAATTCACCCAGAAAAAATAGAAACAGAAGACCAAGAAGCTGTTATTGTGGAGAAAATGCAACAGAAAATTGAACCTGATACAATAACTGTACAAGTCAAGGAGAAGGAACCAAGACAGCCTGTCTCCTTCCTTACAAAACAAAGATCACTCACAGACAGGCAGCAGGAAAGTCATGATGCACTGCTCAAGTGTCTTGCAGAAGATAAGCGATTTGAGAAGAACAGACCAGTTGCTGCTTGCATTATCTATAAATCACTTCTTCAATGGAGATCCTTTGAAGCAGAGAAGACACATATATTTGATAAAATTACTCACACAATCCGATCGTCCATAGAGAGTCAAGAAGGAATCAATGACCTAGCATATTGGCTCTCAATAACTTCAACATTACTGTTTTTTCTGCAAAGCACACTCAAGGCCAGCAATACGACCAAGGCAGTATCTCGAAGCCGGAATTCACCGGCCACTTTATTCGGAAGAATGGCACAAGGCTTGCTTTCATCCTCTATGGGCATGGGGGTTTCAAGTGGCTACAGTGGAATGGTAGGGAAGCCAAATGAGCAATCTAAAGTGGAAGCCAAGTACCCAGCTATTCTATTTAAGCAACATTTGACTGCATATGTTGAGAAGATATATGGAATGATCCGTGATAGTCTAAAGAAAGAGATCAGCCCATTCCTAAATCTGTGCATTCAGGCACCAAGATCGATAAGGACCAGATCAGTACGAGGGTCATCAAGAAATATTCACTCAAATATTGTTGCAAAACAGCAGGCATCAAACATGCATTGGAAAAGCATTGTCAATAAGTTAGATCATACCTTCGCTGTATTGTCTGACAACTATGTCCCTTCCATGATTACAAGGAAGATCTTTAGTCAGGTGTTCTCTTTCATGGATGTCCAGCTCTTCAACAGTTTGTTGCTTCGTCGCGAGTGCTGTTCCTTTAGCAATGGAGAATATTTAAAGGCAGGTTTGCATGAGTTGGAACAATGGTGCATGAAAGCAACTGATCAGTTTGCTGGATCTTCTTGGGATGAACTCAAACACATACGCCAATCTGTGGGCTTTCTGGTGTTAAGTATTCCACAAATATATCGTATTGGAACTATGTTCTGGGATGACAAGTATGGAGCACAGGGGCTATCTCAAGAAGTAATTAACAAAATGAGAGTGCTCATGGCAGAAGACTCCATAAACATACCCAATAACTCCTTCCTTCTTGAGGTGGATTCTAGCATACCATTCTCAATGGAGGAGATGTTTCGTTCAATGAGTGACATAAGGCTATCAGATATCGATGTGGATCCACCAACAATCCTCAGGCAAAGGAATGAAATGAAGAAAATTTTGGGTTCTGATTCAACCTCAGTTTGTGAACAGAATACATTTCATAACATATCGCTGAAATGGAACTGTGACGAGCTTGCCATCTTTGACTTGCTTCTATTATCAACAATGAGAGGATGCGCATTGCCGTCAACCAAATTGGCGCTTCCCCGCATTACCCACACTCCCTTCTCCTTCGCTTTTCCCATTTCTGCAATTCGATTTCCACACTCCGTTAGCCTTCACAGTGGAAATCCCACCACTTTGTTCTGTACCCTTCAATCTAAGGCCAATGCAGAGTTCTCTTCCACTTCGGTTTCTGCCCAAGCCGAAGAGGAGGAAGAAGAAGACAGCTTTCAAGTGCTGAAGGCTCTGAAAAGCGAATACAATGACATACTGATTGTGGACACCCCAAAGTCTAGGATGCTACTCCTTGATTCCGCTCATAACGTTCATAGCATTCTTAATAAGGAGCAAAAATGGACTGGTTCCTACTGGGACGAATTTGCTAGCTTGCCACCTATAGTTCCAAAGGGTCCCATCGCTATCTTAGGTTTGGGTGGTGGAACTGCTGCTCATCTGATGCTTGATCTGTGGCCTTCACTGCAGCTTGAAGGCTGGGAGATTGATGAAATTTTGATTGATTTAGCCAGAGATTTTTTTGGTCTATCTGATCTGGAGGAAGCAACAGAAGATGGTGGCATACTTACTGTTCAAATTGGGGATGTCTTCATTCCATCAGAGAATTTGCACGGAAGATATGCTGGCATAGTTGTTGATTTATTCTCAGATGGAAAAGTTTTGCCCCAGCTGCAAGAGGTTAGTACTTGGTTGGAATTAAATGATAGATTGATGCCTGGTGGTCGATTTATGGTGAACTGTGGTGGCATTGATGGCGGATCAAAGGCCGTGGATGCAAGTTCTGATTCAGAAACTTTGTCAAGTGATATAATATGGTTACAAAATCCAGCATTGAAAGCATTATCCAAAGCATTTCCAGGACAATTAAGTTGGAAGGGATTGGGGAAGGAAGATGGTGAAAATTTCATGGCACTTACAGGACCTTTGCCTGATCTGCAATCATGGTCTGCCAGCCTCTCATCTCCTCTGAGTACAAATGTGAAGCATTGGGAACCCTGTGAGCCTGTTTCTTAA	5976	0.4185	MSASTVESPKEESLPPLAFVSYHPGISSSFVLPFLLPFFSAFFLSSLPLIQPTTFLSYTDSLIFISSPLSVSEIGTPVNIIVGSHVWVEDPEIAWIDGEVTDIKGSDATIVTTNGKTIVADVSGIYPKDTEAPPVGVDDMTKLAYLHEPGVLHNLACRFALNEIYTYTGNILIAVNPFRRLPHLYDIHMMEQYKGAAFGELSPHLFAVADTCYRAMINEHGSQSILVSGESGAGKTETTKMLMRYLAFMGGRSNTEGRTVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKNGKISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPPEDVKKYKLGDPRQFHYLNQSNCYEVANVDDAKEYLETRNAMDIVGISQDEQDAIFRVVAAILHLGNIDFIKGKEVDSSKLKDEKSVFHLHTAAELLMCNEKSLEDSLCKRVIVTPDGKITKPLDPGSAALNRDALAKTVYSRLFDWILDKINSSIGQDPNATSLIGVLDIYGFESFKINSFEQLCINLTNEKLQQHFNQHVFKMEQEEYTKEEINWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQIYKSHKRFSKPKLARTDFTINHYAGDVTYQADYFLDKNKDYVVAEHQALLNASKCSFVANLFPPLPEETSKQSKFSSIGTRFKQQLQSLMETLNTTEPHYIRCVKPNTVLQPGIFENFNVLNQLRCGGVLEAIRISCAGYPTKRTFDEFLDRFGMLAPDVLDGSEEKTACIAICDKMGLKGYQMGKSKVFLRAGQMAELDARRAEVLAKAAKCIQRQIRTHLTRKEFITLRKATIYIQKSWRAKLARKLYEQMRREAASIRIQKHARSHAAKMHYKSLQASAIVIQSGLRAMAARNEFRFRQRTKAATKAQTQWRRVQAFSAYKRLKKATITLQCLWRAKVARKELRKLRMDARETGALKEAKDKLEKRVEELTWRLEFEKHLRIDLEEAKGQEIAKLQSALQEMQGQLDEAHEAIMHEREAAKLAIESAPPVIKEVPVVDNTKLELMTNKNVELESEVEELKKKIEEFEERYSEVEKENQARLKEAEEAQLKATQLQETIERLESNVSNLESENQILRQQALVESKNEELTEELKTLKDQIANLQSENEFIRNQAAAAAVEQKIHPEKIETEDQEAVIVEKMQQKIEPDTITVQVKEKEPRQPVSFLTKQRSLTDRQQESHDALLKCLAEDKRFEKNRPVAACIIYKSLLQWRSFEAEKTHIFDKITHTIRSSIESQEGINDLAYWLSITSTLLFFLQSTLKASNTTKAVSRSRNSPATLFGRMAQGLLSSSMGMGVSSGYSGMVGKPNEQSKVEAKYPAILFKQHLTAYVEKIYGMIRDSLKKEISPFLNLCIQAPRSIRTRSVRGSSRNIHSNIVAKQQASNMHWKSIVNKLDHTFAVLSDNYVPSMITRKIFSQVFSFMDVQLFNSLLLRRECCSFSNGEYLKAGLHELEQWCMKATDQFAGSSWDELKHIRQSVGFLVLSIPQIYRIGTMFWDDKYGAQGLSQEVINKMRVLMAEDSINIPNNSFLLEVDSSIPFSMEEMFRSMSDIRLSDIDVDPPTILRQRNEMKKILGSDSTSVCEQNTFHNISLKWNCDELAIFDLLLLSTMRGCALPSTKLALPRITHTPFSFAFPISAIRFPHSVSLHSGNPTTLFCTLQSKANAEFSSTSVSAQAEEEEEEDSFQVLKALKSEYNDILIVDTPKSRMLLLDSAHNVHSILNKEQKWTGSYWDEFASLPPIVPKGPIAILGLGGGTAAHLMLDLWPSLQLEGWEIDEILIDLARDFFGLSDLEEATEDGGILTVQIGDVFIPSENLHGRYAGIVVDLFSDGKVLPQLQEVSTWLELNDRLMPGGRFMVNCGGIDGGSKAVDASSDSETLSSDIIWLQNPALKALSKAFPGQLSWKGLGKEDGENFMALTGPLPDLQSWSASLSSPLSTNVKHWEPCEPVS	1991

Annotation information

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Bisa12g0205	1991	Pfam	Myosin head (motor domain)	137	792	IPR001609	GO:0003774\|GO:0005524\|GO:0016459
Bisa12g0205	1991	SMART	iq_5	829	851	IPR000048	GO:0005515
Bisa12g0205	1991	SMART	iq_5	925	947	IPR000048	GO:0005515
Bisa12g0205	1991	SMART	iq_5	902	924	IPR000048	GO:0005515
Bisa12g0205	1991	SMART	iq_5	877	899	IPR000048	GO:0005515
Bisa12g0205	1991	SMART	iq_5	806	828	IPR000048	GO:0005515
Bisa12g0205	1991	SMART	iq_5	854	876	IPR000048	GO:0005515
Bisa12g0205	1991	FunFam	unconventional myosin-Va	858	905	-	-
Bisa12g0205	1991	Gene3D	-	905	954	-	-
Bisa12g0205	1991	Gene3D	-	858	904	-	-
Bisa12g0205	1991	Gene3D	-	805	857	-	-
Bisa12g0205	1991	FunFam	Myosin heavy chain	325	380	-	-
Bisa12g0205	1991	Gene3D	Vaccinia Virus protein VP39	1741	1980	IPR029063	-
Bisa12g0205	1991	Gene3D	-	740	802	-	-
Bisa12g0205	1991	ProSiteProfiles	Myosin N-terminal SH3-like domain profile.	81	130	IPR004009	GO:0003774\|GO:0005524\|GO:0016459
Bisa12g0205	1991	FunFam	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	1732	1979	-	-
Bisa12g0205	1991	FunFam	Myosin 2	385	500	-	-
Bisa12g0205	1991	Coils	Coil	995	1022	-	-
Bisa12g0205	1991	PANTHER	MYOSIN	127	1547	-	-
Bisa12g0205	1991	Pfam	IQ calmodulin-binding motif	928	947	IPR000048	GO:0005515
Bisa12g0205	1991	Pfam	IQ calmodulin-binding motif	831	850	IPR000048	GO:0005515
Bisa12g0205	1991	Pfam	IQ calmodulin-binding motif	880	899	IPR000048	GO:0005515
Bisa12g0205	1991	Pfam	IQ calmodulin-binding motif	809	827	IPR000048	GO:0005515
Bisa12g0205	1991	FunFam	unconventional myosin-Va	906	953	-	-
Bisa12g0205	1991	Pfam	DIL domain	1455	1524	IPR002710	-
Bisa12g0205	1991	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	108	858	IPR027417	-
Bisa12g0205	1991	CDD	MyosinXI_CBD	1216	1583	IPR037975	GO:0007015
Bisa12g0205	1991	PRINTS	Myosin heavy chain signature	165	184	IPR001609	GO:0003774\|GO:0005524\|GO:0016459
Bisa12g0205	1991	PRINTS	Myosin heavy chain signature	269	296	IPR001609	GO:0003774\|GO:0005524\|GO:0016459
Bisa12g0205	1991	PRINTS	Myosin heavy chain signature	222	247	IPR001609	GO:0003774\|GO:0005524\|GO:0016459
Bisa12g0205	1991	PRINTS	Myosin heavy chain signature	502	530	IPR001609	GO:0003774\|GO:0005524\|GO:0016459
Bisa12g0205	1991	PRINTS	Myosin heavy chain signature	555	583	IPR001609	GO:0003774\|GO:0005524\|GO:0016459
Bisa12g0205	1991	Gene3D	-	512	696	-	-
Bisa12g0205	1991	Gene3D	-	325	383	-	-
Bisa12g0205	1991	ProSiteProfiles	IQ motif profile.	855	881	IPR000048	GO:0005515
Bisa12g0205	1991	Pfam	Myosin N-terminal SH3-like domain	82	120	IPR004009	GO:0003774\|GO:0005524\|GO:0016459
Bisa12g0205	1991	FunFam	Class V myosin	512	661	-	-
Bisa12g0205	1991	FunFam	unconventional myosin-Va	809	857	-	-
Bisa12g0205	1991	Coils	Coil	1045	1162	-	-
Bisa12g0205	1991	ProSiteProfiles	IQ motif profile.	926	955	IPR000048	GO:0005515
Bisa12g0205	1991	SMART	DIL_2	1454	1542	IPR002710	-
Bisa12g0205	1991	CDD	MYSc_Myo11	149	792	IPR036018	-
Bisa12g0205	1991	ProSiteProfiles	IQ motif profile.	878	907	IPR000048	GO:0005515
Bisa12g0205	1991	ProSiteProfiles	IQ motif profile.	830	859	IPR000048	GO:0005515
Bisa12g0205	1991	Gene3D	Kinesin motor domain	138	735	IPR036961	-
Bisa12g0205	1991	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	1727	1906	IPR029063	-
Bisa12g0205	1991	ProSiteProfiles	Myosin motor domain profile.	135	804	IPR001609	GO:0003774\|GO:0005524\|GO:0016459
Bisa12g0205	1991	ProSiteProfiles	IQ motif profile.	807	834	IPR000048	GO:0005515
Bisa12g0205	1991	ProSiteProfiles	Dilute domain profile.	1265	1588	IPR002710	-
Bisa12g0205	1991	Coils	Coil	956	983	-	-
Bisa12g0205	1991	Gene3D	Myosin VI head, motor domain, U50 subdomain	385	674	-	-
Bisa12g0205	1991	SMART	MYSc_2a	129	805	IPR001609	GO:0003774\|GO:0005524\|GO:0016459
Bisa12g0205	1991	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	859	955	IPR027417	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa12g0205	Bisa-ChrBisa12	2481773	2498845	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa12g0205	189	1611	Myosins gene family	AT2G31900	73.476	0.0	2185