Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bisa12g0190 | ATGGACTCCCCTCTCTTCCCTCAATCCGACGGACACCCGTTTCCCTCTTCCCTTTCCCTCTTCGACACCCCCTATCTCCACCACCTAATCCAGCACCACCTCATTCCATCCGACGCCGACGACGACTACGCCAACGACGACGAGCAAAACGAGGATGTTTTAGAAGACTCGCTATCTTTTCTCTCCCCACTACCTAACTCCCGAAACCCTTGCTCTGATTCTATACCCACTATTCTAGTTACCTCCTCCATTCTGTCGCAGCTTGACCCAGGAGGGGTTTTGTGTGCGATTTGCAAGGACCCAATTGGGGTGAACGCTGAGGCTAAGCAGCTTCCGTGTAAACATTTGTACCACTCCGATTGCATTACGCCTTGGCTGGAGCACCATAATTCGTGCCCGCTTTGCCGGTTTCAGCTCGCCGGTGAGCAAGACGATGGTGTTTCTCAAGCGAGGAGAATAAGGAGGCAATTGAGAACTGCAATGATGAGGTTGTCTGAATTGATGGAAGGGGAGGATGATTTCTATGGGTTGAGGACTACTCTGAGTCACATTGCTAACCACGGAAGCTGA | 570 | 0.5158 | MDSPLFPQSDGHPFPSSLSLFDTPYLHHLIQHHLIPSDADDDYANDDEQNEDVLEDSLSFLSPLPNSRNPCSDSIPTILVTSSILSQLDPGGVLCAICKDPIGVNAEAKQLPCKHLYHSDCITPWLEHHNSCPLCRFQLAGEQDDGVSQARRIRRQLRTAMMRLSELMEGEDDFYGLRTTLSHIANHGS | 189 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bisa12g0190 | 189 | SUPERFAMILY | RING/U-box | 94 | 139 | - | - | |
Bisa12g0190 | 189 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 86 | 151 | IPR013083 | - | |
Bisa12g0190 | 189 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE PRAJA | 45 | 139 | - | - | |
Bisa12g0190 | 189 | SMART | ring_2 | 95 | 135 | IPR001841 | - | |
Bisa12g0190 | 189 | ProSiteProfiles | Zinc finger RING-type profile. | 95 | 136 | IPR001841 | - | |
Bisa12g0190 | 189 | Pfam | Ring finger domain | 95 | 136 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bisa12g0190 | Bisa-ChrBisa12 | 2338695 | 2339344 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bisa12g0190 | 20 | 177 | C3H Transcription Factor Family | AT3G60080 | 36.810 | 3.04e-23 | 92.4 |