Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0178 ATGGAAAACCATCCCGGCCCCGAGAATCCGCCGCAAAAGTGGGGGACGTGGGAGGAACTCTTGCTCGCTTGCGCCGTCAAGCGCCATGGCTCCAAGGATTGGGACGCCGTCGCTATGGAGGTTCAGACCCGAACCACCCTCCCCAACCTCATCACCACCGCTCACTACTGCGAGCAAAAATTCCTAGATCTCAAACGCCGATTCGCCGCCCAGCCAAAAGAAGACGGTCCGGAAACCCTCGCCGGTGACAACGTCGATCATATCCCCTGGCTCGAAGAATTGAAGAAACTCCGCGTCGCGGAGCTCCAGAAAGAGGTTCAGCGCTCCGACATCTCCATTCTGTCGTTACAGCTGAAGGTGAAGAGGTTGGAGGAAGAGAGAGTAAAGGAGAACATTGGAGAAGGGAAAGAAGAAGAGAAGAAACCGGATCTGGCTGACTCCGGCGAGCAGAAACCGCAAAACGACATAAAAGGCGGACAAGAAAAGGCTCCTGAACCGGAGACCCGGCTCGAGAACGATCATAACGGTAAGCAACCTACCGGCGACGAATCCGACCGGGAAAACCAGTCCGTTAACGAGTCAAACTCGACCGTTTCTGTCGGGAAAACCGGGGACGGAGAGGTGAAGCTTGAATCGGTCCCGGTCCATGACGGTCCAAAAGAACCGGATGCGTTCGAGAGGAAGGCGAAACCGGTCGGGGAAGAATCTAATAACGGAAGTTACGATGCCGCTGCTAAAGTGCGAGAATCACTGCCACCGGGTGGGGAGATGAAGGTAGAGGATTCGTCCGAGTTACGAGACTCGGTAACTCACTCGAGGGATGGTGGTGAGGGTGGGACAAGAGACAGCAGTGAGGTCCAGAGCTCGGCGAGTTTGACGAGGAAGAGGAATACGCGGCGGAGGAAGGAGCAGGAGGAACCGCCGGAGAATGACGAGGTGGCCGTGAAATCACAGCCGTTGATTGGCGTGTTGGATCTTATCAAAGGTCACGATAACAGCTCATTGTTCGAGCGCCGTCTCGAGAGTCAGGACTCAGTTAAATACAAGAAAATAGTACGACGGCACATGGATTTGGAAGCCATACAACGGCGACTACGAAACGGCACTTATTCTCGTTGTAGTCAAGCCTTCTTCCGTGACCTCCTCCTCCTATTCACCAACGCCACTGTCTTCTTCCCCACAGACTCCGTCGAATCACGCACCGCTCAGCGGTTGAGCCGCCTTGTCTCCAACGAGATCAAGCACCAGATTCCGACGACCGGACCTGACCCACTTCCCAGAAACACAGATTTACTCCCACCAAATCCCTCGTCATCCAAACCCAAACCCAAACCCGATTCTTTGCTTTCTAAACACAAAGCTTCTGCTCCTATATTGGTCTGCCGGAAACGCAGTTCAATCTCGGCTAAAGCTTCTTCCTCCGCCGCCTTTGGCCAAAAGGGCGACCAACTAGGCCAAGACAAGAAGCCAGCTTCGGACACAGAACCACCATCGAAGCCATCTTCTTCTGATACAGATAAAGAACCTCCTAAGAAGAAGGAGAAGCCAATCACCGGAGTAAGAAGCCTAAGAAGAAGCAACAAAAGCATCAGTCGCAACCCCAGCAAGAAGGCAGGCACGACCAGCAAGCCGCCGGAAAGCACCAAATCAGATAAAATCAAAGCAGAAGGGTCGGGCGGGACCGCAGCCACAGATAAAAAGAGAAGTGCAGCTGTGGATTTCTTGAGAAGGATAAAGCGAAATGCACCCACAGAGACATTAAAGTGTGGTGGTAGTAGTGGTGGAAGTAGTAGCAAAGGTGGTGGGGTTAGTGGAAAAGACCAGAAGAAGATGATGAATAATGGGAAAGCAGACAAGGGGAAAGAAAGATCGTTGAGGTACGGTGGCTATGGCGGTGGCTCCAGCGAGAGAAAGAATGAGAATGAGACGAGCAGTCAATCAAAGAGAAGTGTTGGGAGGCCTCCAAAGAAGGTAGCAGAAACTAGTAATAATGCAGTTTCTGCAAAGCGTGCAAGGGAAAGTAGTGGAAAGGATAAACGCCCTAAGAAGCGTTCTAAGAAGTAA 2064 0.5237 MENHPGPENPPQKWGTWEELLLACAVKRHGSKDWDAVAMEVQTRTTLPNLITTAHYCEQKFLDLKRRFAAQPKEDGPETLAGDNVDHIPWLEELKKLRVAELQKEVQRSDISILSLQLKVKRLEEERVKENIGEGKEEEKKPDLADSGEQKPQNDIKGGQEKAPEPETRLENDHNGKQPTGDESDRENQSVNESNSTVSVGKTGDGEVKLESVPVHDGPKEPDAFERKAKPVGEESNNGSYDAAAKVRESLPPGGEMKVEDSSELRDSVTHSRDGGEGGTRDSSEVQSSASLTRKRNTRRRKEQEEPPENDEVAVKSQPLIGVLDLIKGHDNSSLFERRLESQDSVKYKKIVRRHMDLEAIQRRLRNGTYSRCSQAFFRDLLLLFTNATVFFPTDSVESRTAQRLSRLVSNEIKHQIPTTGPDPLPRNTDLLPPNPSSSKPKPKPDSLLSKHKASAPILVCRKRSSISAKASSSAAFGQKGDQLGQDKKPASDTEPPSKPSSSDTDKEPPKKKEKPITGVRSLRRSNKSISRNPSKKAGTTSKPPESTKSDKIKAEGSGGTAATDKKRSAAVDFLRRIKRNAPTETLKCGGSSGGSSSKGGGVSGKDQKKMMNNGKADKGKERSLRYGGYGGGSSERKNENETSSQSKRSVGRPPKKVAETSNNAVSAKRARESSGKDKRPKKRSKK 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0178 687 MobiDBLite consensus disorder prediction 486 521 - -
Bisa12g0178 687 MobiDBLite consensus disorder prediction 427 441 - -
Bisa12g0178 687 ProSiteProfiles Bromodomain profile. 328 399 IPR001487 GO:0005515
Bisa12g0178 687 SUPERFAMILY Bromodomain 310 417 IPR036427 GO:0005515
Bisa12g0178 687 MobiDBLite consensus disorder prediction 130 189 - -
Bisa12g0178 687 PANTHER DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN 10 687 - -
Bisa12g0178 687 MobiDBLite consensus disorder prediction 611 625 - -
Bisa12g0178 687 CDD Bromodomain 323 413 - -
Bisa12g0178 687 MobiDBLite consensus disorder prediction 470 687 - -
Bisa12g0178 687 CDD SANT 13 45 IPR001005 -
Bisa12g0178 687 MobiDBLite consensus disorder prediction 636 651 - -
Bisa12g0178 687 Pfam Bromodomain 323 403 IPR001487 GO:0005515
Bisa12g0178 687 MobiDBLite consensus disorder prediction 209 233 - -
Bisa12g0178 687 Gene3D - 285 420 IPR036427 GO:0005515
Bisa12g0178 687 MobiDBLite consensus disorder prediction 253 280 - -
Bisa12g0178 687 Pfam Myb-like DNA-binding domain 12 46 IPR001005 -
Bisa12g0178 687 Coils Coil 106 126 - -
Bisa12g0178 687 MobiDBLite consensus disorder prediction 298 312 - -
Bisa12g0178 687 MobiDBLite consensus disorder prediction 569 583 - -
Bisa12g0178 687 MobiDBLite consensus disorder prediction 130 313 - -
Bisa12g0178 687 MobiDBLite consensus disorder prediction 522 546 - -
Bisa12g0178 687 MobiDBLite consensus disorder prediction 586 603 - -
Bisa12g0178 687 SMART bromo_6 309 418 IPR001487 GO:0005515
Bisa12g0178 687 MobiDBLite consensus disorder prediction 414 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0178 Bisa-ChrBisa12 2150783 2153853 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bisa12g0178 Bromodomain 6.8e-12 No_clan