Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0170 ATGTGGAGATTTAAGCCATTCACGCTTAAAGAGCCAGCTGGGCTTGAAGGACGCTATATAGATGTTGGCAATCTCAAAATAAATGTTCAGAAGACCATAGCTGAAGGGGGGTTCTCTTGTGTTTACTTGGCTCGTGATGTGGTAAATATGTCAAAACAATATGCTTTGAAGCACATTATATGCAATGATGAAGAATCCCTTGGATTAGTAAAACAGGAGATATCAGTGATGAAGTCCCTGAAAGGCCATCCCAATGTTGTCACACTGTATGCACACGCAATATTTGATATGGGTAGGACAAAAGAAGCATTCCTTGTGATGGAATTCTGTGAAAAGGCTCTGGTGCATGTGCTGGAGAGCCGAGGTGCTGGGTATTTTGATGAGCAACGGGTTTTGTTGATCTTCAGGGATGTATGTAATGCAGTTTTTGCTATGCACTGCCAATCTCCCCCTTTTGCTCACCGAGACTTAAAAGTTGAAAATATTCTATTAGCTTCAGATGGCTTATGGAAGTTGTGTGACTTTGGAAGCACATCCACCAATCACAAGCGTTTTGAGAAACCAGAAGAAATGGGGATTGAGGAAGACAATATCAGAAAGTATACAACCCCTGCCTACAGGGCCCCCGAGATGTGGGATCTGTTTCTGAAAGAAGTCATTAATGAGAAGGTGGACATATGGGCTCTTGGGTGTATTCTTTTTCGCATATGCTACTTCAAGAGTGCATTTGATGGAGAGTCAAAGCTTCAAGTCTTAAATGGAAACTATCGCATTCCTGATTCACCTAAATACAGCTCATCCATTGTAGACCTAATCAGAGACATGCTTCAAGCTAGACCAGATGACAGACCAGATATCACGCAGGCAAGCGCTTTGCTTGATTGGCCATTCATCTCCATGAATTTAGGTTGGCTAATGTTGGATAATTTACCATGGTGGCAGGTCTGGTTTCTTGTTAATCAGCAGTTGCCTCTTGATTTGCAGAAGTCATTACCTGACAGACCACCCGAAATGCCTTCTTCCAACAACCATGAAGTTGCTTCAAAGGCTGCAAGTAGATCAACCCCAATACCTCAAAAGAGTCCTTCCCCACCATCTGGAGAACCTAAAAATACATCACAGCCATCCCTTGTTTCTAGGAGTGGTGGAGGTGGATGCGGGGGCCAGCTTGGTGCTTTCTGGTCAAGTCAGCATGCGAAAGATTCACTTGTCACAGAGGAAAAGGGCAAACCCATTTTTGATGAAGAACCATCTAGCCATCCCATTTCATCAAAACATGATAGAATCCGTCCAGACAAAAATCAATTACCCAATAATGTTAGCTCTAACAAAGTGGTCAATCCACAATTTCAAACTGTGCAAAGCAGTGCACATGGAAAATCACACAAGCCTGAGATTGGGTCTTCCAATGACTTTGAAATAAATTTTTTCCGGGGTACAAATCAAAGTAGTGACCAGAGAATGTCATCAAGTATGGAAAACAAGGATACTTTTCAAGACCAGGCTTTTGACACTTTTGTTGCTGAATTTGATACAAATAAATTTAACTCTGGATTCAGTCATAAACCTGATAGGGAAGAAGCATTAGAGGCTGAGGTGGAGAAACTCAAAGAGCAGCTGAAGGAAGCTAACTTGGGGAAAGCTGAAATAACTTCCAAGTACGAAAAGCTGACTGCCATCTGCCGATCTCAAAGGCAAGAGCTCCAGGTTCTCAAGCAAGCACTCGCAGCAAGAACTCCACCAAATAAAGGGGGTTTGGGAACCTCTTCTGCAGTTGCAACATCTGCTGCTGTGAGACAGAACGCTGGTGGGACAGTTTGGGAATTTGCACAAAATAAAACAGAATGGAAAACTCCAGGTTCAGAGCCCAAGTCATGGCAAGCTTTTCCAGAGGAACCCCAGCAACAGAAGTCCTTTTCAGCAGACAATACTTCCAGGTCTCTTGGGAATCGGAGTGGTCAGCAAAACAGGCAGCCTGCTCAAACCGATTTTGAAACTTGGGGTTTTGGAACTGATAACTTTACTGCTATGCGTGCTGGAAACCAACAGATGATAAGGCAGACTAGTGAAGGGAGTAGTTCTCAGGCCAAGTCTACCTTTGAGAGCAAGACAGCTTCTCAACCTGCTGGATGGGCTGGTTTTTAA 2145 0.435 MWRFKPFTLKEPAGLEGRYIDVGNLKINVQKTIAEGGFSCVYLARDVVNMSKQYALKHIICNDEESLGLVKQEISVMKSLKGHPNVVTLYAHAIFDMGRTKEAFLVMEFCEKALVHVLESRGAGYFDEQRVLLIFRDVCNAVFAMHCQSPPFAHRDLKVENILLASDGLWKLCDFGSTSTNHKRFEKPEEMGIEEDNIRKYTTPAYRAPEMWDLFLKEVINEKVDIWALGCILFRICYFKSAFDGESKLQVLNGNYRIPDSPKYSSSIVDLIRDMLQARPDDRPDITQASALLDWPFISMNLGWLMLDNLPWWQVWFLVNQQLPLDLQKSLPDRPPEMPSSNNHEVASKAASRSTPIPQKSPSPPSGEPKNTSQPSLVSRSGGGGCGGQLGAFWSSQHAKDSLVTEEKGKPIFDEEPSSHPISSKHDRIRPDKNQLPNNVSSNKVVNPQFQTVQSSAHGKSHKPEIGSSNDFEINFFRGTNQSSDQRMSSSMENKDTFQDQAFDTFVAEFDTNKFNSGFSHKPDREEALEAEVEKLKEQLKEANLGKAEITSKYEKLTAICRSQRQELQVLKQALAARTPPNKGGLGTSSAVATSAAVRQNAGGTVWEFAQNKTEWKTPGSEPKSWQAFPEEPQQQKSFSADNTSRSLGNRSGQQNRQPAQTDFETWGFGTDNFTAMRAGNQQMIRQTSEGSSSQAKSTFESKTASQPAGWAGF 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0170 714 SMART serkin_6 27 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0170 714 MobiDBLite consensus disorder prediction 410 445 - -
Bisa12g0170 714 Gene3D Transferase(Phosphotransferase) domain 1 11 297 - -
Bisa12g0170 714 MobiDBLite consensus disorder prediction 410 433 - -
Bisa12g0170 714 ProSiteProfiles Protein kinase domain profile. 27 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0170 714 MobiDBLite consensus disorder prediction 628 706 - -
Bisa12g0170 714 Coils Coil 526 574 - -
Bisa12g0170 714 PANTHER SERINE/THREONINE PROTEIN KINASE 1 698 - -
Bisa12g0170 714 CDD STKc_GAK_like 26 288 - -
Bisa12g0170 714 Pfam Protein kinase domain 29 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0170 714 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Bisa12g0170 714 FunFam probable serine/threonine-protein kinase DDB_G0280111 10 331 - -
Bisa12g0170 714 MobiDBLite consensus disorder prediction 335 357 - -
Bisa12g0170 714 MobiDBLite consensus disorder prediction 330 392 - -
Bisa12g0170 714 MobiDBLite consensus disorder prediction 614 714 - -
Bisa12g0170 714 SUPERFAMILY Protein kinase-like (PK-like) 28 299 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0170 Bisa-ChrBisa12 2086475 2089665 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0170 26 286 Miscellaneous Gene Families AT2G34180 29.889 2.11e-19 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Bisa12g0170 Pkinase 1.5e-40 CL0016