Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0149 ATGGTTTTCTCTTCTATTCCAGTCTATTTAGATCCTCCCAATTGGCAGCAGCAACCAAATTTTCATCATCAAATAAATGGGAATGGTGAGCTTCCTCCGCTTCCCCCACAAGCCCCTCAGGTGGGCTCAATCAGGCCGGGATCAATGGCGGATCGGGCCCGGCTAGCGAAGATGGCACCACCGGAGCCCGCTCTCAAGTGTCCTCGCTGCGATTCCACCAACACCAAATTCTGCTACTTCAACAACTACAGCCTCTCTCAGCCCAGGCACTTCTGCAAGACCTGCCGGCGTTACTGGACAAGAGGCGGCACTCTTCGGAACGTCCCGGTAGGTGGGGGATGCCGGAGGAACAAGAAGGCCAAAAGAAGTCGCTCCAATTCCCCCGCCCCCACAGACAAACCGCCCCTTTCCGATCCCCCCGCCGCCACTGGGATGATCGGTCAGTTGGTACCACAACCGTGCAGCTTACCTTTCATGGCGTCCTTACAGAATCTGAGCAGGTATGGCATGGGAAGCATGGGAATAAACTTGCAGGGACAGAGTGATACTAATACTATGGGGTTTCACATAGGAATTGGAAGTAATAATAATGTTTCAAGTGGAGGAATGGATCAATGGCGGTTACAGCAATTCCCTTTCTTGAATGGTTTAGAGGCAGCTTCGGGTGCTTCATTGATCCCATTTCAAAGCGAAGTTGGGGGTAATATGGGTGTGGGGGCAAGTTCTAGGGTTTCTCAGCTGCCTCCAGTTAAATTGGAAGATAGTGGAGCCCTAAATTTGTCAAGATCGCCTCTGAGTATGTCAGAAAATAACAGCCAATACTATTCATGGACTACCACCAATGATTTATCAGGCCTTGCCTCTTCTTCCCCTAGCCATGTCCTGTAG 888 0.509 MVFSSIPVYLDPPNWQQQPNFHHQINGNGELPPLPPQAPQVGSIRPGSMADRARLAKMAPPEPALKCPRCDSTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGTLRNVPVGGGCRRNKKAKRSRSNSPAPTDKPPLSDPPAATGMIGQLVPQPCSLPFMASLQNLSRYGMGSMGINLQGQSDTNTMGFHIGIGSNNNVSSGGMDQWRLQQFPFLNGLEAASGASLIPFQSEVGGNMGVGASSRVSQLPPVKLEDSGALNLSRSPLSMSENNSQYYSWTTTNDLSGLASSSPSHVL 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0149 295 ProSiteProfiles Zinc finger Dof-type profile. 65 119 IPR003851 GO:0003677|GO:0006355
Bisa12g0149 295 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 53 176 IPR045174 GO:0003700|GO:0006355
Bisa12g0149 295 ProSitePatterns Zinc finger Dof-type signature. 67 103 IPR003851 GO:0003677|GO:0006355
Bisa12g0149 295 Pfam Dof domain, zinc finger 64 119 IPR003851 GO:0003677|GO:0006355
Bisa12g0149 295 MobiDBLite consensus disorder prediction 109 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0149 Bisa-ChrBisa12 1851974 1853064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0149 35 292 C2C2-Dof Transcription Factor Family AT3G55370 41.837 4.62e-51 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bisa12g0149 zf-Dof 8.8e-33 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g0149 12 1851974 1853064 Bisa02g3835 02 92278143 92280435 CCT