Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0143 ATGGGTAACGGCTTAGGCAAGCTGACCGTGTGCTTCACCGGCCACGGTGCCCGCCGCCGGAAGCAGGACATATCCATTTTGATTACAGAGCCACTCGACGAAGGACTCGGCCACTCCTTCTGCTATGTTCGACCCGACCCGTCCCGTCTGTCATCTTCCAAAGTCCACTCCGAGGAGACGACCACCTTCCGAACAATCTCAGGCGCATCTGTGAGTGCCAACACATCGACGCCTCTCTCGACGGCCTTCGTTGACTTGTACTCCTATGGCTGTATTGACAGAGCTGCAGCTTTTGAGAGTTCAACTTCTTTCGCGTCTCTTCCTCTCCAACCAATCCCTAGAAATCTCATGAATTCAGGTCCCTTCTCTGGAAATCTCGGCATGGTTCCCGGGTCGGGTCCGCTCGAAAGAGGGTTTATGTCGGGCCCGATAGAGCGTGGGTTTATGTCGGGTCCAATCGATCGAGGGTTGTTCTCGGGTCCGATGGAAAAGGATAGCTCCGATCAATTTCAGAGAAGCTTCTCTCATGGGGGTTTTGCGTTTAGACCAAGAACGCGGAAGGGTCGATGGATTCAAGTTCTTCAGAGGGCAATTTCCAAAACGTTATCTCGGGGACAGAACTCGATTGTCGCTCCGATTAAGGGGATTAAGGAACCGGAGTGGATCATCGGACCGGAGAGGCCCAACGAGAATCTGACGGTGAGTAGTGTGAATTTCAGCAGCGATGGTAGCCTGGAAGATGACGATTCAATGGAAAGTCAGAATCTTCAATGGGCTCAAGGGAAAGCGGGTGAGGACAGAGTCCATGTTGTGGTATCAGAAGAACACGGATGGGTTTTCGTAGGGATTTACGATGGTTTCAACGGTCCCGATGCTCCCGATTACCTTCTCTCAAATCTGTACGGCGCCGTGCATAAAGAATTGAAGGGATTATTATGGGACGACGGATTTGAACCCCCCTCCGCCGCCGCCGCTAACACCTCCGGCCACCCGCTGGAGAATTCCCCTATGGAGGCGGAAGATTCGTTACAGAGCAGCGACAGTGATGTTGGGAAGGACAGAACGGTGGATGCTTGTTCTCAATGTGTCGAGCAAGGGAATCATGCGTCTGCAAGTGGGGATGCGAATATTGATAAGAGAAAGAGAGGTAAGAATTCAAAGATCAAGTACAGAGGGGCAGCGAAGAAATGGGAGGAGAATCAGAGAAGGTGGAAGTGTGAATGGGATCGCGAAAGAGTAGAGCTTGATAGAAGATTAAGGGAACAACTGAATCGATCTGGGTCTGCTGGTAGTAACAGCCCGATTAATCATTCTGAAGTATTGGAAGCTCTCTCGGAAGCTCTGAGAAAGACAGAGGAGTCTTATTTGGAAATCGCAGATAAGATGGTGATGGAAAATCCAGAGCTAGCTCTAATGGGTTCGTGTGTTCTTGTGATGTTGATGAAGGGGGAGGATATTTATGTACTGAACGTAGGTGATAGTAGGGCTGTTCTAGCTCAAAAGGCCGAGCCTGATTACTGGCTTGGGAAAATCAGGCAGGACTTGGAGAGGATCAATGAAGAAACAATGCATGATCTTGAATCACTGGATGGTGAAAAATCAAATCTGGTTCCCAGTCTAAATGCTATTCAGCTCACCAAGGATCACAGTACCAATGTTGAGGAAGAAGTCCAGAGAATAAAGAAGGAACACCCAGATGATACTTGTGCAGTGTTTAACGATCGTGTCAAGGGTTCTCTCAAGGTCACACGAGCATTTGGTGCCGGATTTCTCAAACAGCCTAAGTGGAACAATGCAATTCTGGAGACGTTCAGAATAGAGTACGTAGGAACTTCTCCATACATCACCTGCCTGCCATATCTAAAGCACCACAGATTAAGCCCAAAGGATAAATATTTGATTCTGTCCTCTGATGGGCTGTATCAGTACTTGACAAACGAAGAAGCTGTAGCAGAAGTTGAGCTTTTCCTCACTCTGCAACCTGAAGGAGACCCTGCTCAGCACTTGGTCGAAGAAGTTCTATTTCGTGCTGCAAAGAAAGCTGGTTTGGACTTCCACGAGTTGCTGGAAATACCACAGGGTGACAGGCGTCGTTACCATGATGATGTTTCTATCATTGTTATTTCTTTGGAGGGAAGGATATGGTATGGAGATCCTGGGTATAACTATAGCTAA 2175 0.4855 MGNGLGKLTVCFTGHGARRRKQDISILITEPLDEGLGHSFCYVRPDPSRLSSSKVHSEETTTFRTISGASVSANTSTPLSTAFVDLYSYGCIDRAAAFESSTSFASLPLQPIPRNLMNSGPFSGNLGMVPGSGPLERGFMSGPIERGFMSGPIDRGLFSGPMEKDSSDQFQRSFSHGGFAFRPRTRKGRWIQVLQRAISKTLSRGQNSIVAPIKGIKEPEWIIGPERPNENLTVSSVNFSSDGSLEDDDSMESQNLQWAQGKAGEDRVHVVVSEEHGWVFVGIYDGFNGPDAPDYLLSNLYGAVHKELKGLLWDDGFEPPSAAAANTSGHPLENSPMEAEDSLQSSDSDVGKDRTVDACSQCVEQGNHASASGDANIDKRKRGKNSKIKYRGAAKKWEENQRRWKCEWDRERVELDRRLREQLNRSGSAGSNSPINHSEVLEALSEALRKTEESYLEIADKMVMENPELALMGSCVLVMLMKGEDIYVLNVGDSRAVLAQKAEPDYWLGKIRQDLERINEETMHDLESLDGEKSNLVPSLNAIQLTKDHSTNVEEEVQRIKKEHPDDTCAVFNDRVKGSLKVTRAFGAGFLKQPKWNNAILETFRIEYVGTSPYITCLPYLKHHRLSPKDKYLILSSDGLYQYLTNEEAVAEVELFLTLQPEGDPAQHLVEEVLFRAAKKAGLDFHELLEIPQGDRRRYHDDVSIIVISLEGRIWYGDPGYNYS 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0143 724 Pfam Protein phosphatase 2C 440 661 IPR001932 -
Bisa12g0143 724 SUPERFAMILY PP2C-like 262 711 IPR036457 -
Bisa12g0143 724 SMART PP2C_4 249 708 IPR001932 -
Bisa12g0143 724 Coils Coil 441 461 - -
Bisa12g0143 724 MobiDBLite consensus disorder prediction 233 260 - -
Bisa12g0143 724 ProSiteProfiles PPM-type phosphatase domain profile. 248 710 IPR001932 -
Bisa12g0143 724 Gene3D - 229 714 IPR036457 -
Bisa12g0143 724 Coils Coil 512 532 - -
Bisa12g0143 724 MobiDBLite consensus disorder prediction 327 344 - -
Bisa12g0143 724 MobiDBLite consensus disorder prediction 322 353 - -
Bisa12g0143 724 CDD PP2Cc 417 710 IPR001932 -
Bisa12g0143 724 PANTHER PROTEIN PHOSPHATASE 2C 246 708 IPR015655 GO:0004722|GO:0006470
Bisa12g0143 724 MobiDBLite consensus disorder prediction 365 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0143 Bisa-ChrBisa12 1788080 1790787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0143 1 715 PP2C-type Phosphatase Gene Family AT1G07630 66.804 0.0 931