Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0142 ATGTCATCTCCTACTCCTACTCCTAGAGACAATCATAGCGTTGGTAATGATGTTGAAATAAATTTAGACCCCTTAGATGTTTTGAATTCAAATGAGGATGAGGTACAACCTAAGGCTAAAAGAGCTAAAGTCACTACATCAGATGTGTGGAAGTCCTTCACTAAAATTGGTGTTGTTAATGGAAAGGAAAAGGCTAGGTGTAATGGATGTAGTAAAGAGTATGTAATTGGGAGCAATAAATATGGAACGTCGACTTTGTTGCGTCATATTCCAAAATGTGTATCTCTTCCTAAATATCACAATATTGGAGTAATGATGTTGGATGAACAAGGAAGATTGAGATCTAGGCAACTTGATCACAAACGTGTGCGGGAAGTTATGGCAGAGGCTATTATTGCACATGACCTCCCATATTCTTTTGTTGAATATCATAAGATTAGGGAGCTTTGTAAAATATTGAATCCAGATGCGAAATCTTATACTAGATATACTGCAATGAATGATGGGTTGAAAGCTTGTAGTGATGGTTTACACCAAATTAGGGAGAGTATCAAATATGTGAAAGGTTCCGAAGCAAGAAAAATTATGTTTGCCAAGTGTGTGGAGCAAGTGGGAGACATTGACACTAGTGCGGGGTTACGGTTAGATGTTCCCACTAGATGGAATTCGACATATGTCATGTTAGAGAATGCTTTGAAGTACCGACGTGCTTTTGGGAGTCTGGCATTGCATGATAAAAATTATTTGACTTATCCATCGGATGAGGAGTGGAGGAGAGATATAGCAACAAGAATGAAAGGGAAATTTGACAAGTATTGGAGTGAATACAGTGTTATTCTTGCCATTGCCTCTGTGCTTGATCCAAGGATGAAATTTGAAATGATTCAATATTGCTATTTAAAAATTAATCATATGGATTGGAAGGACAAGTTAGACCACATAAAGAGAGAGATGTACAACCTTTTTTCTACTTATGAGAAGAAATGTTCTAATCTTTGTTCAACTTCAAGCTTGTCTGCACATCCTCTACCTACTCAACACAATTATCCGGGATGCATGTGGGGTATACTTCATATTCTTGACTATCATCATTGGTATAATGTCAAAAAGGTGTTACCACTCAGAAAGCATTACTGGGGAAGACTTGCCACATATAGGAGAAAAGCCATATTATATTACCATGGGATCAGTGAAGACCAAAAATTTACTGCTTCAGAAACACAACCCCTCCTGACCAAGCAACATAGCAGAAAAGTCAGTGCAAACGGCAAAAGATCTCCTAGAAGATGCAAGAAAGAATCACACATAGAAGATGGGTTTGAGGAAGAAAACTCCGAAGGCTGGATCTTAAGCTTCCCTTCTGAACCACAAAATTTGGAATCTTCAAAAGAATCTATGCAGTGTAAAGCAAGTGGTATCACTAATTCCAATGACTACTCAAGGAAGAACCAGAGTGCTGCACTTGATCAAAAGTTTGGGGATGCAAGCATGTTTAACAGTGACATTTCTAATGAACTGAATGAGCATACTGATCTTTTGGAGGTATTTAGAGTGGAAAAGGATTTACTCCTGAAAATTTTACAAGATGTTGGTGGGAAAAGCTTCCAGCATGCATCCAACAACAAAGGAAGATTGACAAAATCAGGGTCGTTTCCTCTTGCTAAATCTTCACTAGTGAGAGACATTGGCTCTACTTCCCTCAACCACAAGAAGAATGAAGTTTGGGCCTTCCCCAAGGATGAAAACTCACTCACATTTACATCTCATTCTAAGAAAATGTCCTTAGTTACTGATCATGATGTAGATGGAGGTACCAAAGAAAAACCAGGTGTTTCCTCCTCAGGGTCTTCCCATGGATTTAATCACGGAGGGTGGAATCAACTGGTTCTTCACCGTTTCAAAGTTATAAAGCAGAAGATAAAGCAGGCTCTTGTGGAATTCACAAGAAATGGTTACCAAAACTCCATTGAAGCAATTCAACACAGACGCAGAGCTTCTTCTGAATATAGGCTCCCAAGTAAAAATGTAAGAGAGGCATCACAGAGTTTAGATGATGGGATGGCTCAAGTTTATATTGAGAGTAGAAACTCATTGGACGCTAAGGCTTCTGATCATGATTCCTACAGACATGAAGTTGGCCTCATGAGAAGAACATCTTCTCTAAATGAATCACTTGATAGATATACTCAGTTGTTTGAGCAAAGCTTCCACAAAGACATGAAATGGCATAACTCAATGTCCAAAAGCTTAAAAGTGAGATATGAGGATAAGAGTGAAATGAGTAGGCGAAGAAATCTGTCTCTGCCTAATCTGGATCCTCTAGGATTTCTTCTACATGAGGCGACTCGTGATACAAATCCAGTAAATAACATAAATGCTGAACTTGATATTCATGTTCAACAAAATCCTAGCGAGTCAGAAATTCAGGAAGTGGTGGATAGCAGTGACAATTACGATGTGAACCCCGTCACTGTGGAGGAATATGAAAAAGAAGTTACCATTGACAATGGAGAGGACATACATGAGACAGCGATGGAAGATGGAAAAGATGAATTGGCCGTCCTTGAAACTACCTACGAGGACGATGCAGCAGAAGAAATCATAGCAGGGAGTGAGACAAATATCAGAGGAAAAGGCACAAACAGGAGTGGCGACATCAATTTTCTGCTTTCTGAATCAGACATAGAAGACGATCTCAATTTCAAATATGTAAAAGACGTTATTGAATTGTCGGGCTTCATGGATGAAGATGAGGGTATTAAAACATGTCATAGAGACCAGCCACTGAAATCTTCCTTATTCAAGTATTTGCATGAAGAAACAGAATGCTCAGAAGAAGAGATTAGCAGGAACTATGATCACCAGCTTCTTTCCAATTTAGTAAACGAGGTACTCCATGAAATACATGAGAGATCATCAACCTACTTCCCAATGCCCTTCTCCTTCAACCCTGGACTTCGTCCAGTGCCTAAGGGGCAGCATCTTCTGAAGCAAGTATGGAGTGGAGTTGATTCGTTCCTAAGGATGAAGCCAGAGCTAGACCAGACATTAGATGATGTTGTGTCTCGAGATTTGGCACTTTGTGGCTGGATGAACCTCCAATGGGAAGAGGAGTGTGTAGCACTTCAACTAGAGGACATGATTGTGGAAGATCTGTTAAATCAAGTTATCTTCTCATGA 3180 0.3947 MSSPTPTPRDNHSVGNDVEINLDPLDVLNSNEDEVQPKAKRAKVTTSDVWKSFTKIGVVNGKEKARCNGCSKEYVIGSNKYGTSTLLRHIPKCVSLPKYHNIGVMMLDEQGRLRSRQLDHKRVREVMAEAIIAHDLPYSFVEYHKIRELCKILNPDAKSYTRYTAMNDGLKACSDGLHQIRESIKYVKGSEARKIMFAKCVEQVGDIDTSAGLRLDVPTRWNSTYVMLENALKYRRAFGSLALHDKNYLTYPSDEEWRRDIATRMKGKFDKYWSEYSVILAIASVLDPRMKFEMIQYCYLKINHMDWKDKLDHIKREMYNLFSTYEKKCSNLCSTSSLSAHPLPTQHNYPGCMWGILHILDYHHWYNVKKVLPLRKHYWGRLATYRRKAILYYHGISEDQKFTASETQPLLTKQHSRKVSANGKRSPRRCKKESHIEDGFEEENSEGWILSFPSEPQNLESSKESMQCKASGITNSNDYSRKNQSAALDQKFGDASMFNSDISNELNEHTDLLEVFRVEKDLLLKILQDVGGKSFQHASNNKGRLTKSGSFPLAKSSLVRDIGSTSLNHKKNEVWAFPKDENSLTFTSHSKKMSLVTDHDVDGGTKEKPGVSSSGSSHGFNHGGWNQLVLHRFKVIKQKIKQALVEFTRNGYQNSIEAIQHRRRASSEYRLPSKNVREASQSLDDGMAQVYIESRNSLDAKASDHDSYRHEVGLMRRTSSLNESLDRYTQLFEQSFHKDMKWHNSMSKSLKVRYEDKSEMSRRRNLSLPNLDPLGFLLHEATRDTNPVNNINAELDIHVQQNPSESEIQEVVDSSDNYDVNPVTVEEYEKEVTIDNGEDIHETAMEDGKDELAVLETTYEDDAAEEIIAGSETNIRGKGTNRSGDINFLLSESDIEDDLNFKYVKDVIELSGFMDEDEGIKTCHRDQPLKSSLFKYLHEETECSEEEISRNYDHQLLSNLVNEVLHEIHERSSTYFPMPFSFNPGLRPVPKGQHLLKQVWSGVDSFLRMKPELDQTLDDVVSRDLALCGWMNLQWEEECVALQLEDMIVEDLLNQVIFS 1059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0142 1059 PANTHER PROTEIN TRM32 344 1059 IPR044257 -
Bisa12g0142 1059 MobiDBLite consensus disorder prediction 1 20 - -
Bisa12g0142 1059 Pfam Domain of unknown function (DUF4413) 253 325 IPR025525 GO:0003677
Bisa12g0142 1059 MobiDBLite consensus disorder prediction 598 618 - -
Bisa12g0142 1059 SMART bed5 44 96 - -
Bisa12g0142 1059 MobiDBLite consensus disorder prediction 407 436 - -
Bisa12g0142 1059 Pfam Domain of unknown function (DUF4378) 901 1054 IPR025486 -
Bisa12g0142 1059 SUPERFAMILY Ribonuclease H-like 150 327 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0142 Bisa-ChrBisa12 1772186 1780467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0142 511 1048 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 29.494 1.16e-43 169
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g0142 12 1772186 1780467 Bisa12g0142 12 1772186 1780467 ECH