Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0139 ATGGGAGTTTGTTTGAGCGCCCAAATTAAGGCTGAGAGCCCATGCAACACAGGGTTAAGTTCAAAATATGGGAGCACCGACGGAAATGATGTGAGCAGCACAAGCAGTAAGGTGTCAACAGCGTCAGTGCCTCAGACTCCACGGAGTGAGGGAGAGATCTTGCAGTCATCTAACCTAAAGAGCTTCACATTAGCAGAACTGAAGATGGCCACCAGAAATTTCCGTCCAGATAGTGTATTAGGAGAAGGTGGCTTTGGATCAGTGTATAAGGGTTGGATCGATGAGCATTCCCAGGCTGCTACCAAACCTGGCACTGGCATTGTTATTGCTGTCAAAAGACTTAATCAAGATGGTTTCCAAGGTCACAAAGAGTGGTTGGCTGAAGTGAACTATCTTGGACAGCTTTCTCACCCTCATCTTGTCAAGTTAATTGGGTATTGCCTGGAAGACGAACACCGCCTTTTGGTCTATGAATTTATGCCTCGAGGCAGCTTGGAGAATCATTTGTTCAGAAGAGGCTCGTATTTTCAACCTCTTTCTTGGAGTCTCCGCATGAAGGTTGCTCTCGGTGCTGCCAAAGGGCTTGCATATCTTCACAGTGCCGAAACGAAAGTGATATACCGGGATTTTAAGACTTCAAATATCTTGCTGGATTCAAAATACAATGCAAAACTTTCTGATTTCGGGCTGGCCAAGGATGGACCGACCGGTGACAAAAGTCATGTCTCCACTAGGGTAATGGGAACCTATGGATATGCAGCTCCTGAATATCTAGCCACTGGTCACCTAACTGCCAAGAGCGATGTCTATAGTTTTGGAGTTGTGCTGCTTGAAATGTTATCTGGTAGGCGAGCAGTTGATAAGAATAGACCATCTGGTCAGTACAATTTGGTGGATTGGGCTAAACCCTACCTGGCAAATAAACGAAAGATATTTCGCGTGGTGGACAGCCGCCTCGAAGGTCAGTATGCAGTGGATGAGGCTTATAAGGTAGCTACGCTTGCTTTGCGATGCCTGTCCAGCGAGTCCAAGTTAAGGCCAAACATGGATGAGGTTGTTACAGCTTTGGATAAGCTGCAAGTTCCAGTTAATGAAAATCTGAGCCATTCAAACTCTTCAGTCCGTCGGTCTCGTGCTCGAAGAAAAAGTGCTGATGATGCTCATCGGGGGAGAGCCAGCGTGGCCTATCCCCGGCCATCTGCTTCTCCCCTCTATGCTTGA 1221 0.4709 MGVCLSAQIKAESPCNTGLSSKYGSTDGNDVSSTSSKVSTASVPQTPRSEGEILQSSNLKSFTLAELKMATRNFRPDSVLGEGGFGSVYKGWIDEHSQAATKPGTGIVIAVKRLNQDGFQGHKEWLAEVNYLGQLSHPHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGSYFQPLSWSLRMKVALGAAKGLAYLHSAETKVIYRDFKTSNILLDSKYNAKLSDFGLAKDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGQYNLVDWAKPYLANKRKIFRVVDSRLEGQYAVDEAYKVATLALRCLSSESKLRPNMDEVVTALDKLQVPVNENLSHSNSSVRRSRARRKSADDAHRGRASVAYPRPSASPLYA 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0139 406 PANTHER OS01G0588500 PROTEIN-RELATED 40 360 - -
Bisa12g0139 406 FunFam Serine/threonine-protein kinase BIK1 41 159 - -
Bisa12g0139 406 SUPERFAMILY Protein kinase-like (PK-like) 51 364 IPR011009 -
Bisa12g0139 406 MobiDBLite consensus disorder prediction 366 406 - -
Bisa12g0139 406 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Bisa12g0139 406 ProSiteProfiles Protein kinase domain profile. 74 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0139 406 FunFam Probable serine/threonine-protein kinase PBL8 160 376 - -
Bisa12g0139 406 Pfam Protein tyrosine and serine/threonine kinase 78 356 IPR001245 GO:0004672|GO:0006468
Bisa12g0139 406 MobiDBLite consensus disorder prediction 14 52 - -
Bisa12g0139 406 CDD STKc_IRAK 80 359 - -
Bisa12g0139 406 Gene3D Phosphorylase Kinase; domain 1 49 159 - -
Bisa12g0139 406 Gene3D Transferase(Phosphotransferase) domain 1 160 384 - -
Bisa12g0139 406 MobiDBLite consensus disorder prediction 378 392 - -
Bisa12g0139 406 ProSitePatterns Protein kinases ATP-binding region signature. 80 112 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0139 Bisa-ChrBisa12 1752077 1754807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0139 52 356 Glycoside Hydrolase AT3G07070 51.961 5.55e-109 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bisa12g0139 PK_Tyr_Ser-Thr 3.9e-46 CL0016