Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0136 ATGAAGTGCTTCCATTTCTCGAACGGAGGAGGAGACACGCGGGAAGACGATGACTCCGTTATCTCCAGGGCCTCCAAGCCCTCCTGGGCTCGCTCTCTCAGCATCGCTTCTTCTACCCTGGGCTCAAGGAGGTCCGAATTTGATTCCGACTTCAGGGACTTCTCCGATTCCATTGATTTCCAGAACTTCTTGTCTCAGAGGCGAGCTAATGATCTGCGCGTCTTCTCCTTCTCCGACCTTAAACTGGCAACTCGTGGTTTCAGTAGAGCCCTCTTGATTGGAGAGGGGGGGTTTGGCTGTGTGTATAAAGGGGTTGTCAGAGTACCCACCCAGGATGGAAATGATGCCTCTCTTTCCGATATGGATGTTGCAATCAAGCAGCTGAACCGCAATGGACACCAGGGGCACAAGGAGTGGATTAATGAAGTGAACTTGTTGGGTGTAATCAAGCATCCAAATCTTGTTAGGTTAGTGGGGTATTGTGCAGAAGATGATGAAAGAGGGGTTCAACGACTTTTGGTCTATGAGCTTATGCGGAATAAGAGCTTGGAAGACCATCTTTTGGCTCGAGTGCCATCAACACTCACATGGATGGCAAGATTAAAGATTGCTCAAGATGCAGCCCGTGGTTTGGCATACCTGCATGAAGAAATGGATTTTCAGCTTATATTTCGGGATTTCAAGACATCCAACATCCTGCTAGACGAGGAGTTCAATGCGAAGCTTTCCGATTTTGGACTTGCTAGGCAAGGACCCTCAGAAGGATTTGGCCATGTTTCAACATCAGTTGTTGGCACTATAGGTTATGCTGCACCAGAGTATGTTCACACAGGTAGGTTGACTGCAAAGAGTGATGTATGGAGCTTCGGTGTAGTTCTGTATGAGCTCATCACCGGAAGGCGAGCCGTAGAGAGAAACCTACCAAGAAATGAACAAAAGCTTTTGGATTGGGTAAGACCTTTTGTTTCTGACCTTAGGAAGTTCCATCTTCTGGTAGACCCACGGCTTGAAGGACAGTATTGCATTAAATCAGCTCAAAGACTTGCAACCCTGGCAAACAAGTGCCTCATGAAACAGCCAAAGTCCCGTCCTAAAATGAGTGAAGTGGTTGAGGTCCTTGGAAACATTATCAACGACACAGTTTCTAAGTATGAATGCACATTTCTAAGTGGGCAAGAAAAAGAAGTGAAGTTATCAGTAGAGGACAATGAGTCTGAGACAGCCAAACAAGGGAATAATTATCTAAAGAAGGTGTTTGACTTGAGAGAAATGGTGAGCTTAAGAAACAAATCTATTGGAAGGTTGGATTGGAAAAATTGGGCTCATGGACTGGTAAGAAGTTGA 1344 0.4591 MKCFHFSNGGGDTREDDDSVISRASKPSWARSLSIASSTLGSRRSEFDSDFRDFSDSIDFQNFLSQRRANDLRVFSFSDLKLATRGFSRALLIGEGGFGCVYKGVVRVPTQDGNDASLSDMDVAIKQLNRNGHQGHKEWINEVNLLGVIKHPNLVRLVGYCAEDDERGVQRLLVYELMRNKSLEDHLLARVPSTLTWMARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEEFNAKLSDFGLARQGPSEGFGHVSTSVVGTIGYAAPEYVHTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLDWVRPFVSDLRKFHLLVDPRLEGQYCIKSAQRLATLANKCLMKQPKSRPKMSEVVEVLGNIINDTVSKYECTFLSGQEKEVKLSVEDNESETAKQGNNYLKKVFDLREMVSLRNKSIGRLDWKNWAHGLVRS 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0136 447 Pfam Protein tyrosine and serine/threonine kinase 93 373 IPR001245 GO:0004672|GO:0006468
Bisa12g0136 447 MobiDBLite consensus disorder prediction 1 20 - -
Bisa12g0136 447 Gene3D Transferase(Phosphotransferase) domain 1 178 395 - -
Bisa12g0136 447 Gene3D Phosphorylase Kinase; domain 1 67 177 - -
Bisa12g0136 447 ProSitePatterns Protein kinases ATP-binding region signature. 93 126 IPR017441 GO:0005524
Bisa12g0136 447 ProSiteProfiles Protein kinase domain profile. 87 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0136 447 SUPERFAMILY Protein kinase-like (PK-like) 69 373 IPR011009 -
Bisa12g0136 447 FunFam Serine/threonine-protein kinase BIK1 56 177 - -
Bisa12g0136 447 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 178 386 - -
Bisa12g0136 447 CDD STKc_IRAK 93 376 - -
Bisa12g0136 447 PANTHER OS01G0588500 PROTEIN-RELATED 51 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0136 Bisa-ChrBisa12 1746977 1749651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0136 73 408 Glycoside Hydrolase AT3G07070 47.522 5.96e-95 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bisa12g0136 PK_Tyr_Ser-Thr 2.5e-47 CL0016