Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0127 ATGGATTCGCCTTGTATCTCGAGTACAATCGACGGATTTAAACCCAACCAAGAGCTTGTTACCCTCAATTATGATCAGTATTCTCACCCCGTCAATGGAATCGACCCATTCATGAACTTTGGATTCATGGATGACCCCATTCTTTCTCCTGATACCGACTATGCTGGAAATCCTGCTCCTGCGTCTACCATTAGTACGGACGTACAGTCTCCATTGAATGAGAGTGACTTTACCGGTGCTGTCCTAGGGTACATAAACCAAATGCTTATGGAAGAGAACATGGAAGAGAAGCCCTGCATGTTCCATGATTCCTTGGCTCTCCAGTCTGCTGAGAAATCTTTATACGAGGTTATTGGCGAGAAATACCCTTCGAATTCATCCAATCAACATCGTCCTCTCAACTATCACCATGTGGGAAGCCCCGAGGAGAGTCTCTCATGTAACTTCAGTGATCGTATTAGTTGTGGCACTTTTGCAACTACTAGTACTGCCAACTCCGTTGAGTCCCACTGGGGCAACGTTGATCTTACATATTACCGGCCTTCTCTACTGCAAGTCACTTTTCCAGATAACTTTGTTTTCCAATCTCCTTCGACATCCACTCAACCATTTTCCAAGAACAGTACGAGCAGCTTCAGAAGTGGCCGAAAATATAGTACGTTCATGGGGAATCACAGGTCTGGCTTTTCAGATTCTACATTGAGGGAGTCTGTGTTGCAATTTGAGAGAGGTGTAGAAGAAGCCAGTAAGTTTCTGCCTAAGCATAATCCATTGGTGATTGACTTGGAGGCCAAGGGCAAATCCAGTTCTTCACTCCGAAGTTATCCACAGGTGGTAATTAAGAGGGAGAGAGATGAAAGTGAGCAAGAAGATGGGATAGAATCAGATGGGAGGAGCAAGAAGCAGTCAGCAGTTTGCATGGATGATGGTGAGCTATCAGAACTATTTGACAAGGTACTTATTGGTACTGGGTGGGGAAAAGAGCCACCTCCTTTATGTATTTGCCATGGTAATGCTAATGCACATACGTGCTCGCAGCCCCAGAAAGATGAGGAACCAAACAAATATAGTGAAGGAAAGAGCCGTGTGAGAAGGCAGATCTATAAACAGGAAGTGGTGGACTTGGATCTAAGGACAGTACTAATTCAATGTGCACAAGCTGTTTCCTCAGAAGATCTTTCGACTGCTAACAAGTTATTGAATCAGATTAGGCTGCATTCTTCTTCAGTGGGGAGTGCTTCTCAGAGGTTAGCCCATTACTTTGCAGATGCCCTTGAAGCACGCTTGAATGGCACTGGCTCTCAGACCTGCACTGCCTTATCCTCCAAAAGAACTTCTGCTGCAGACATGGTAAAAGCTTACCAAATGTTTATCACAGCCTGTCCATTCCACAAGATAGCAATTATTTTTGCAAACCACACAATTATACATATGGCCAATGAGGTGGAAACACTACACATCATAGATTTCGGTATTCTTTATGGCTTCCAATGGCCAGGCCTGATCTTTCGTCTCTCCAAACTTCCTGGCGGTCCTCCCAAGCTGCGCATCACGGGGATAGATCTCCCACAACGTGGTTTCAGGCCAGCCGAGAGAGTCCAGGCAACGGGGCGTCGCCTAGCAAAGTATTGTAAGCGCTTCAATGTTCCATTTGAGTATAATGCCATAGCACAGAAATGGGAGACCATCAGAATTGAGGACCTGAAGATAAAGAAAAATGAACATGTAGTTGTGAACTGTTTGCTCCGGTTTAAGAATCTGCTTGATGAGACAGTTGTGGTGAATAGTCATAAAGATGCTGTTTTGAGTTTAATTAGGAAGGCAAACCCTAGATTGTTCTTGCAGACTGAAGTCAATGGATGCTACAATGCACCCTTCTTTCTGACAAGGTTCCGGGAGGCTCTTTTCCACTACTCTTCAGTCTTTGACATGCTTGACACTAATGTTGACAGAGAAGATCCAATGAGGTTGATGTTTGAGAAGGAGTTCCTTAGGAGGGAGTTAGTGAATATCATAGCTTGTGAGGGTCTTGAGAGAGTTGAGCGACCTGAAACATACAAGCAATGGCAGGTTCGGAACACGAAAGCCGGGTTCAGGCAGCTTCCCTTGGATCCCCTTCTGATCAGCAGATTCAGGACCAAGTTGAGAGAAGTTTACCACAGTGATTTCATGCTTGATCAAGATCGTAATTGGATGCTTCAAGGATGGAGGGGCAGGATTGCTTATGCTTCCACCTGTTGGGTTCCAGCTTAG 2253 0.4505 MDSPCISSTIDGFKPNQELVTLNYDQYSHPVNGIDPFMNFGFMDDPILSPDTDYAGNPAPASTISTDVQSPLNESDFTGAVLGYINQMLMEENMEEKPCMFHDSLALQSAEKSLYEVIGEKYPSNSSNQHRPLNYHHVGSPEESLSCNFSDRISCGTFATTSTANSVESHWGNVDLTYYRPSLLQVTFPDNFVFQSPSTSTQPFSKNSTSSFRSGRKYSTFMGNHRSGFSDSTLRESVLQFERGVEEASKFLPKHNPLVIDLEAKGKSSSSLRSYPQVVIKRERDESEQEDGIESDGRSKKQSAVCMDDGELSELFDKVLIGTGWGKEPPPLCICHGNANAHTCSQPQKDEEPNKYSEGKSRVRRQIYKQEVVDLDLRTVLIQCAQAVSSEDLSTANKLLNQIRLHSSSVGSASQRLAHYFADALEARLNGTGSQTCTALSSKRTSAADMVKAYQMFITACPFHKIAIIFANHTIIHMANEVETLHIIDFGILYGFQWPGLIFRLSKLPGGPPKLRITGIDLPQRGFRPAERVQATGRRLAKYCKRFNVPFEYNAIAQKWETIRIEDLKIKKNEHVVVNCLLRFKNLLDETVVVNSHKDAVLSLIRKANPRLFLQTEVNGCYNAPFFLTRFREALFHYSSVFDMLDTNVDREDPMRLMFEKEFLRRELVNIIACEGLERVERPETYKQWQVRNTKAGFRQLPLDPLLISRFRTKLREVYHSDFMLDQDRNWMLQGWRGRIAYASTCWVPA 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0127 750 MobiDBLite consensus disorder prediction 280 304 - -
Bisa12g0127 750 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 294 737 IPR005202 -
Bisa12g0127 750 Pfam GRAS domain family 377 747 IPR005202 -
Bisa12g0127 750 ProSiteProfiles GRAS family profile. 368 748 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0127 Bisa-ChrBisa12 1657912 1660164 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0127 81 750 GRAS Transcription Factor Family AT1G07530 52.766 0.0 678
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bisa12g0127 GRAS 5.7e-110 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g0127 12 1657912 1660164 Bisa02g3858 02 92618229 92620505 CCT
Bisa02g3859 02 92624468 92629678 Bisa12g0127 12 1657912 1660164 CCT
Bisa12g0127 12 1657912 1660164 Bisa12g0127 12 1657912 1660164 ECH