Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0126 ATGGATCCACACTTGCCTGGAAGTCACGATTTCATAAACGGTTACAAAGTAGGTGATTCTGATGCCACGGTCCTCAATCAATACCCAATTCTAGGAAATGACTGGGATCTCGATGAACACTATCAGAACCTTGTCAATTTCTCCGGTGATCCTTTTTATCGACCTGGTGTGGACCTTCTTGGTTTTCCTTCACACACGAGCGTGATTTCTGAAGAAGCACACACGAGCGTGATTTCTGAAGAAGCAGCTGGGCTGAATCCATCGTGGAGTTTGAGTCCTGTGCAAGGTTTGCCACATGTCCCATCTGAAACCAATACCGTGACTTCGACGGTGGATCCTTCCCTGGAAGACACGGACTTTTCAGAATCCGTCAAGTACATGAGCCAGATTCTTATGGAAGAGAACTTGGAACAGAAGCCATGCATGTTTTACGATCCACTCAGTCTGAAGCTCACTGAGAAATCATTCTATGATGCTCTCAGAGACAACTATCCTCCCCCTTACCAAAATCCCCTCCTCGACAGCGTGGAAAGCCCAGATGGTCATTCTTCCGGAACTAGTATTGATTCTGGTAATAGCAGTGGGAGCACCAGCACCAGCACCAACACAAGCGCCAACGACTCACTAGAGTTGAAGCCCTTTTCACTGCATACCCCCGTTTCTGGTGATTCCATGTCTCCACCGCCAAATGATTTGACTAATATAGGTGATGGACTGTTGAATTTGGATTCTTCTATTTCTAAACTCTTGGCTCAAAACATCTTCAGTGATGCAGAATCTGTGTCCCAATTCAACAGAGGTTTAGAGGAAGCCAGCAAATTTCTTCCCAGAGGAGTTCAACTCGTCACTGGTTTGGAGAGCAACACAGTGTCTGCAGAGTCAAAGGGAGTGGGAGAAAAGGCAGTAGCGAATAGGGAGAATTGGCCTGGGTCAAAGGGTAGAAAGAATCATGAGCGTGAAGGTAGTGATGAAGAAGAAGAAGGGAGAAGCAACAAGCAATCAGCAGTGTATGTTGATGAGAGTGAATTATCAGACATGTTTGATAGAGTGTTGCTCAATGTTGAGAATGTTTCACTGTGTCCTGAGCATGAAAGCATGCAGTGTAGCAGCTCTGTCAAAGACTTGCAGCCAAATGAAGAGGCTCATTCCTATGATGGAGGGAAGACTCGATCTAAGAAAGAAGGTAGGAAGAAAGAAACCGTGGATTTGAGGACACTTCTGATTTTATGTGCACAAGCTGTGTCTGCCAGTGATAGCAGAACTGCACATGAATTACTGAAGCAGATAAGGCAGCATTCTTCCCCCTTGGGGGATGCATCACAGAGAGTGGCTCATTACTTTGCCAATGGGCTTGAGGCACGTTTGGTTGGTGCTGCTACTGGTACCCAGCTATTTTATACCTCTCTGAACTCCAAGAGGATTTCTACAGCTGATATTCTGAAAGCTTACCAAGTTTCAGTATCTTCCTCACCTTTCAAAAAGTTAGCACATTTCTTCTCAATCAAAATGATTCTCAAAGCAGCTGAGAAGGCAGAAACCCTTCATATCATCGATTTTGGTATCCTCTATGGTTTCCAATGGCCAATACTCATCAAGTTTCTGTCAAATAGAGATGGTGGACCTCCCAAGCTACGCATCACTGGAATAGAGTTTCCCCAACAAGGGTTTCGTCCAGCAGAAAGAATAGAGGAAACGGGTCGTCGTCTAGCCAACTATTGCAAGCGTTTCAATGTCCCATTTGAGTACAAAGCCATAGCTTCCCAGAACTGGGAAACCATCCGAATCGAAGACCTTAAGGTTCAGAGGAATGAGGTACTTGCTGTGAACTGTTTCTTAAGGTTTAAGAACATACTGGACGAGACAATTGAAGTGAACAGTCCTAGGAATGCTTTTCTGAACCTAATAAGGAAGATGAATCCAGATATTTTTGTACAATCCATTATCAATGGACATTACAATGCCCCATTCTTTGTCACACGGTTCAGGGAGGCACTGTTCCATTTTTCTGCACTGTACGACGTGTTTGACACTCTGATACCCCGTGAGAACGAATCGAGGTTGATGCTTGAGAAAGAGTTCTATGGTCGGGAGGCCATGAATGTTGTAGCATGTGAAGGTCTGGAGAGGGTTGAGAGGCCTGAGACGTACAAGCAATGGCAGGTAAGGGTTTCAAGGGCTGGTTTCAGGCAGCTCCCACTGAATAAGGAGCTAATGGCCAAGTTCAGGGACAAGATGAAGGCATGGTACCATAAAGACTTTATGTTTGATGAAGACTGCAACTGGATGCTTCAAGGCTGGAAGGGACGCATTTTATATGCTTCCACTTGTTGGGACTCAAAGGTTTCAGATCAGGCTGAATCTTTAATGCATTTGGTGGTAAAATTGGAACGAAAGTGGGCTTAG 2403 0.4503 MDPHLPGSHDFINGYKVGDSDATVLNQYPILGNDWDLDEHYQNLVNFSGDPFYRPGVDLLGFPSHTSVISEEAHTSVISEEAAGLNPSWSLSPVQGLPHVPSETNTVTSTVDPSLEDTDFSESVKYMSQILMEENLEQKPCMFYDPLSLKLTEKSFYDALRDNYPPPYQNPLLDSVESPDGHSSGTSIDSGNSSGSTSTSTNTSANDSLELKPFSLHTPVSGDSMSPPPNDLTNIGDGLLNLDSSISKLLAQNIFSDAESVSQFNRGLEEASKFLPRGVQLVTGLESNTVSAESKGVGEKAVANRENWPGSKGRKNHEREGSDEEEEGRSNKQSAVYVDESELSDMFDRVLLNVENVSLCPEHESMQCSSSVKDLQPNEEAHSYDGGKTRSKKEGRKKETVDLRTLLILCAQAVSASDSRTAHELLKQIRQHSSPLGDASQRVAHYFANGLEARLVGAATGTQLFYTSLNSKRISTADILKAYQVSVSSSPFKKLAHFFSIKMILKAAEKAETLHIIDFGILYGFQWPILIKFLSNRDGGPPKLRITGIEFPQQGFRPAERIEETGRRLANYCKRFNVPFEYKAIASQNWETIRIEDLKVQRNEVLAVNCFLRFKNILDETIEVNSPRNAFLNLIRKMNPDIFVQSIINGHYNAPFFVTRFREALFHFSALYDVFDTLIPRENESRLMLEKEFYGREAMNVVACEGLERVERPETYKQWQVRVSRAGFRQLPLNKELMAKFRDKMKAWYHKDFMFDEDCNWMLQGWKGRILYASTCWDSKVSDQAESLMHLVVKLERKWA 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0126 800 MobiDBLite consensus disorder prediction 368 396 - -
Bisa12g0126 800 ProSiteProfiles GRAS family profile. 394 778 IPR005202 -
Bisa12g0126 800 MobiDBLite consensus disorder prediction 310 333 - -
Bisa12g0126 800 MobiDBLite consensus disorder prediction 378 396 - -
Bisa12g0126 800 Pfam GRAS domain family 403 777 IPR005202 -
Bisa12g0126 800 MobiDBLite consensus disorder prediction 176 209 - -
Bisa12g0126 800 MobiDBLite consensus disorder prediction 288 337 - -
Bisa12g0126 800 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 342 773 IPR005202 -
Bisa12g0126 800 MobiDBLite consensus disorder prediction 167 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0126 Bisa-ChrBisa12 1643003 1645606 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0126 124 777 GRAS Transcription Factor Family AT1G07530 51.089 0.0 654
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bisa12g0126 GRAS 8e-110 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g0126 12 1643003 1645606 Bisa02g3859 02 92624468 92629678 CCT
Bisa02g3860 02 92645302 92647341 Bisa12g0126 12 1643003 1645606 CCT