Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0125 ATGATGTCTAGGGATTCCCTGGTCGAAATCCTTGATGATTCAGTATACAGAGAGAACAATTTAGAATCATCCCCCTCTGATATTTCTAGTTCTTCTTCTTCTGCCACCAACTCAAATGAAGAATCTACAGAAATCAACAAGTACTCTAACCCCATACTCAGATACATAAGCGACATCCTCATGGATGAAGACGACTTGGAGCATAACTCCCTGTTACAAGATTCTTTGGCACTCCGAGCTGCTGAAAAATCATTCCATGACGCCCTTGGTCCTAGTTTCCATGATCAGAAAGTGCATAACCCAGACGACAATTATGCATATACTGCTAGTGCTGAGAGCAATAGCAGCTATACTAGTACGGATCATTCATACCAGTCTGATTTGTCTTCTATCCTACGTCCTGAGGTAACAAGTGGATCAAGGGAAAAGAGAAGCCATGGGATAGATGATACTACAAAGCAAGAAGAGGGAAGAGGAAGCAAACTTTCAGCTGTGTATTCAGAGGATTCAGAGGCATCAGATTTGTTTAACGAGGTACTACTCTGTCTAGGTGGAATAAGTGAGTCCATAGCATGTGCTGCTCATGGACCATCATCACCAAATGGTAATCTCCAGTCAAAGGAATCTCATGGAAAGGCAAATCGTTCAAAGAAAAGGGCTAGCAGAGGGACAACAGTGGATTTATGGACTCTACTAACTCAATGTGCACTGGCAGTGGCAAATTATGACCAAGGGAGTGCAAATGACCTTCTCAAGCAGATAAGGGAGCACTCTTCTCCTTTTGGTGATGGAATGCAGCGTTTAGCTTATTACTTTGCCAATGGACTGGAGATGCGATTGGCTGCTGGGAAGCCATCCTATGCGCCACTTTATTCCGATGGGGCAACTGCTGCTGATGTGTTAAAAGCTTACAAACTATACATTACAGCATCTCCTTTCCAGAGAGTCTCAAATTTCATTGCTAATAGAATGATTATGAAGCAAGTAGAGAAGGAAAGCAGCCTTCACATTATTGATTTTGGGATTAACTATGGTTTCCAGTGGCCTTGCCTTATTCATCATCTTGCAATGAGACCAGGAGGGCCTATCAAGCTGCGTATAACAGGGATTGATTTTCCTCAACCAGGATTTCGACCTGCAGAAAGGGTTGAGCAGACAGGGAGGCGTTTGGCTAATTTCTGCAAGAGGTTCAATGTGCCATTTGAATACAATTGTATTGCACAGAAATGGGAAACCATAAAACTCAAGGACCTCAAAATAGACACAAGTGAGATGACAGTTGTGAACTGCATGTACCAAATGAAGATCCTGCCAGATGAAACTGTAGCAGTGAACTGTCCGAGAGATGCTGTCTTAAAGATGATAACGAATATCAAACCAAGCATATTCGTACATGGGGTTGCTAATGGTGCATATAACGCACCTTTTTTCCTAACTCGGTTCAGGGAGGCGCTGTTCCACTTCTCGACATTGTTTGATATGTTAGAGGCTAATGTGGGACGTGAAGATACAGATAGAGTGATGTTTGAGAAGGGGATATTTGGAAGGGATGTGATGAATGTGATAGCGTGTGAGGGGGCAGAAAGAGTTGAAAGGCCAGAGACATATAAGCAATGGCAGATTAGGAACCAGAGATCTGGGTTCAAGCAAATCCGATTGGAGGAGGAACGCTTGAATAAAGCCAAAGAATTTGTGAAGATGGAATATCATAAGGATTTTGTAGTGGATGAAGATGGCAAATGGGTTTTGCTGGGATGGAAAGGCCGTATTATTCACGCTCTTTCCTGTTGGAAACCTGCTTAA 1803 0.4287 MMSRDSLVEILDDSVYRENNLESSPSDISSSSSSATNSNEESTEINKYSNPILRYISDILMDEDDLEHNSLLQDSLALRAAEKSFHDALGPSFHDQKVHNPDDNYAYTASAESNSSYTSTDHSYQSDLSSILRPEVTSGSREKRSHGIDDTTKQEEGRGSKLSAVYSEDSEASDLFNEVLLCLGGISESIACAAHGPSSPNGNLQSKESHGKANRSKKRASRGTTVDLWTLLTQCALAVANYDQGSANDLLKQIREHSSPFGDGMQRLAYYFANGLEMRLAAGKPSYAPLYSDGATAADVLKAYKLYITASPFQRVSNFIANRMIMKQVEKESSLHIIDFGINYGFQWPCLIHHLAMRPGGPIKLRITGIDFPQPGFRPAERVEQTGRRLANFCKRFNVPFEYNCIAQKWETIKLKDLKIDTSEMTVVNCMYQMKILPDETVAVNCPRDAVLKMITNIKPSIFVHGVANGAYNAPFFLTRFREALFHFSTLFDMLEANVGREDTDRVMFEKGIFGRDVMNVIACEGAERVERPETYKQWQIRNQRSGFKQIRLEEERLNKAKEFVKMEYHKDFVVDEDGKWVLLGWKGRIIHALSCWKPA 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0125 600 ProSiteProfiles GRAS family profile. 219 598 IPR005202 -
Bisa12g0125 600 MobiDBLite consensus disorder prediction 91 164 - -
Bisa12g0125 600 MobiDBLite consensus disorder prediction 13 44 - -
Bisa12g0125 600 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 154 590 IPR005202 -
Bisa12g0125 600 Pfam GRAS domain family 230 598 IPR005202 -
Bisa12g0125 600 MobiDBLite consensus disorder prediction 137 157 - -
Bisa12g0125 600 MobiDBLite consensus disorder prediction 17 44 - -
Bisa12g0125 600 MobiDBLite consensus disorder prediction 196 220 - -
Bisa12g0125 600 MobiDBLite consensus disorder prediction 106 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0125 Bisa-ChrBisa12 1633289 1635091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0125 19 600 GRAS Transcription Factor Family AT5G59450 44.781 3.02e-173 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bisa12g0125 GRAS 3e-114 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g0125 12 1633289 1635091 Bisa12g0125 12 1633289 1635091 ECH