Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0118 ATGATAAAACATGTCACAAGTAGCAAAGTAGAAGAACCAAAGGTTTCTGGAGACCCGTTGGCGCAATTCCAGAAGGGTGCAGTTCTCATGGTCTGTAGGACTTGCGGGAAGAAGGGTGACCACTGGACTTCAAGGTGTCCTTACAAGGATCTCGCCCCTCCAGTTGAGGGGTTTGTTGATAAGCCTGCAGCATCAGAAGCTGCAACTGCTGCTTCTGGTCCAACTAAGGGAGCGTATGTACCTCCTGGTCTAAGAGCAGGTGCAGGTGCAGAAAGGACTGGATCGGACATGCGGCGTAGGAATGATGAAAATTCTGTACGTGTCACCAACCTCTCAGAGGATACAGGAGAACCTGATTTACTTGAACTGTTCCGTCCTTTTGGTGCTGTAAGCAGAGTCTATGTTGCTATTGATCAAAAAACTGGCATGAGCAGAGGATTCGGCTTTGTTAACTTTGTGAACAGGGAAGATGCACAGAGAGCTATTAACAAACTCAATGGATACGGTTACGACAATCTCATCCTTAGAGTTGAATGGGCCACACCAAGGACAAACTAA 558 0.4713 MIKHVTSSKVEEPKVSGDPLAQFQKGAVLMVCRTCGKKGDHWTSRCPYKDLAPPVEGFVDKPAASEAATAASGPTKGAYVPPGLRAGAGAERTGSDMRRRNDENSVRVTNLSEDTGEPDLLELFRPFGAVSRVYVAIDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRTN 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0118 185 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 29 181 - -
Bisa12g0118 185 FunFam Eukaryotic translation initiation factor 3 subunit G 67 185 - -
Bisa12g0118 185 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 106 172 IPR000504 GO:0003723
Bisa12g0118 185 SUPERFAMILY RNA-binding domain, RBD 94 184 IPR035979 GO:0003676
Bisa12g0118 185 Pfam Eukaryotic translation initiation factor 3 subunit G 13 51 IPR024675 -
Bisa12g0118 185 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 104 182 IPR000504 GO:0003723
Bisa12g0118 185 SMART rrm1_1 105 178 IPR000504 GO:0003723
Bisa12g0118 185 Gene3D - 61 185 IPR012677 -
Bisa12g0118 185 CDD RRM_eIF3G_like 105 180 IPR034240 -
Bisa12g0118 185 MobiDBLite consensus disorder prediction 66 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0118 Bisa-ChrBisa12 1561213 1562077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0118 8 183 Eukaryotic Initiation Factors Gene Family AT3G11400 75.978 4.16e-96 280