Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0116 ATGGCAGAGATATGCTGCGGAGTGGTGAACGATAGTGAGACTTCGGGTGCGTGCAAGCCCAGTTCGCGCGAAGCCAGGAGGAGGAGAATAGAGATCGGGCGGTTCAAGGTTGTGGACGGGGTCGGGATGCCCCACCAGGAGTCCCACACCGACGAGAAGCGTCCAAAACTCCACCCGGGCTCGCCATCCCTGTCTCGAGACTGTGACAATGCCGTCGAGAACTGTGCCACTGACATAGAGAAAGCCCTCGTCTTTCTAACGCCTGACAACGCCAAATCGGAGAGCGACGAGAAACAAAACTCGAGTGTCGTGGACTCGCCAGTTTTGCTCAGGCTGTACCCCAAGTTTGGGGTGGCATCGGTGTGTGGAAGACGCAGAGATATGGAGGATGCGGTGTCTATCCACCCTCGGTTTTGCCGACACCAACAATCCTCTGCTGAATTCCATTACTTTGGAGTTTACGATGGCCACGGTTGCTCTCATGTATCAGCCAAGTGTAGGGAGCGATTACATGAGTTGGTCAAAGAAGAGCTAGAGAGAGAGGAGTCGTCCAAGGAATGGGAAGGTGCGATGGAGCGAAGCTTCTCGCGAATGGACAAGGAGGTGATTGCTTGGTCAGCTAATGTTCTGAAAGCCAATTGCAAGTGTGAACTTCAATCGCCTCAGTGCGATGCCGTAGGATCTACCGCTGTCGTCGCTATTTTGACCGCCGATAAACTCATCGTCGCCAACTGCGGCGATTCCAGGGCTGTCCTCTGCCGCGACGGCAAACCCCTCCCTCTCTCCTCCGATCACAAGCCGGATCGTCCAGACGAGCTGAATCGGATCCAGGAGGCCGGAGGGCGAGTGATATATTGGGACGGACCCCGTGTTCTGGGCGTGCTTGCGATGTCGAGAGCCATAGGTGACAACTACTTGAAGCCGTACGTGAGCTGTCTTCCGGAGGTGACAATAACGGATCGGACTGCGGAGGATGACTGTCTGATACTGGCGAGTGATGGACTGTGGGACGTCGTGTCGAATGAGACGGCGTGCGGGGTGGCGCGTATGTGTTTGCGGGGGAGAACTCACGCGCCGCCGGGGGTGGCGACGGAGTTGGAGTGCGAAGTGGATGGGGTGGCGCTGGAGATGTCTGACAAGGCGTGCTCTGACGCTTCAATGTTGCTGACGAAGCTTGCTTTGGCAAGGCACTCCACTGACAACGTCAGCGTGGTGGTGGTTGATCTCAGGAGGAGGGTCTGA 1242 0.5668 MAEICCGVVNDSETSGACKPSSREARRRRIEIGRFKVVDGVGMPHQESHTDEKRPKLHPGSPSLSRDCDNAVENCATDIEKALVFLTPDNAKSESDEKQNSSVVDSPVLLRLYPKFGVASVCGRRRDMEDAVSIHPRFCRHQQSSAEFHYFGVYDGHGCSHVSAKCRERLHELVKEELEREESSKEWEGAMERSFSRMDKEVIAWSANVLKANCKCELQSPQCDAVGSTAVVAILTADKLIVANCGDSRAVLCRDGKPLPLSSDHKPDRPDELNRIQEAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVSCLPEVTITDRTAEDDCLILASDGLWDVVSNETACGVARMCLRGRTHAPPGVATELECEVDGVALEMSDKACSDASMLLTKLALARHSTDNVSVVVVDLRRRV 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0116 413 FunFam Protein phosphatase 2C 37 110 413 - -
Bisa12g0116 413 MobiDBLite consensus disorder prediction 39 65 - -
Bisa12g0116 413 MobiDBLite consensus disorder prediction 45 60 - -
Bisa12g0116 413 SMART PP2C_4 105 407 IPR001932 -
Bisa12g0116 413 Gene3D - 110 413 IPR036457 -
Bisa12g0116 413 Pfam Protein phosphatase 2C 116 369 IPR001932 -
Bisa12g0116 413 SUPERFAMILY PP2C-like 109 410 IPR036457 -
Bisa12g0116 413 ProSitePatterns PPM-type phosphatase domain signature. 150 158 IPR000222 GO:0043169
Bisa12g0116 413 ProSiteProfiles PPM-type phosphatase domain profile. 115 409 IPR001932 -
Bisa12g0116 413 PANTHER PROTEIN PHOSPHATASE 89 409 IPR015655 GO:0004722|GO:0006470
Bisa12g0116 413 CDD PP2Cc 115 401 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0116 Bisa-ChrBisa12 1551185 1552854 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0116 1 411 PP2C-type Phosphatase Gene Family AT2G29380 57.282 9.42e-154 437