Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0105 ATGTGCTCGAAAGTGCAGGGGATGCTGGAGATTCCAGTCAAAGGATTTGCCGATAACTTGATGAACATGCATGGATTCACTCTGCCTCTAACTGGAAACAGCTTCCTTTGCTGCACTAAGCTCTATATCAGATCTCTTGGACCTTCCCTCTTTTACCTGCAAAACCTTGCCAGTTCTTCCTTTGCAACTTGCAAATTTAGGAGTCGACGTGATTTGAATCCCCTTCCATTGCATTTGGAATCGAATTACTATTCGCCTTTATACTGGAGTTATAAGGAGAAAAGAAGAGGTATTATTACTCTGGTGAGAGCCAGCCGTGGGGAGTCTCCTTATGAAGTTCTCGGTGTATCTCCATCAGCAACTGTGGATGAAATCAAGAGGGCATACAGGAAACTTGCTCTCAAGTATCATCCCGATGTCAATAAAGAGGATAAGGCGCAGGAGAAGTTCATGAGGATAAAACATGCATACAATACATTGCTAAATTCTACTTCGCGTAGAAAATATGATTCTGGAAATCGTGGTTCATATTATTCTTCTCAAAGAAGCCAAAGTGGAAGTACACAAGCAGAAGAAGAATTTTATGGATTAGAGGACTTCTTTAAAGATCTTCAAGAAGAATTCAGGAACTGGGAAGCGAACTCTGCTTCACAAGGAAAGCCAAAGAGCCTATGGGAGGAATTAGCTGAAATAGGAGAAGAATTTGTGGAGTTTCTCGAGAAAGAACTTAATATAGTTGAACCAAATAACAATTCTAAAACGACTCAGGGAGAAAATCCTTCTCATACACCTGGCAAGGACTCTCAAGATGAAGCTGGCAAGGGAAACAGCAGCATTGAGGATAACCTTGATGAAATAGAAGCCGCTCTTGCTCAGTTAAAAAAGGAATTAGGTTTATAG 900 0.41 MCSKVQGMLEIPVKGFADNLMNMHGFTLPLTGNSFLCCTKLYIRSLGPSLFYLQNLASSSFATCKFRSRRDLNPLPLHLESNYYSPLYWSYKEKRRGIITLVRASRGESPYEVLGVSPSATVDEIKRAYRKLALKYHPDVNKEDKAQEKFMRIKHAYNTLLNSTSRRKYDSGNRGSYYSSQRSQSGSTQAEEEFYGLEDFFKDLQEEFRNWEANSASQGKPKSLWEELAEIGEEFVEFLEKELNIVEPNNNSKTTQGENPSHTPGKDSQDEAGKGNSSIEDNLDEIEAALAQLKKELGL 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0105 299 ProSitePatterns Nt-dnaJ domain signature. 150 169 IPR018253 -
Bisa12g0105 299 MobiDBLite consensus disorder prediction 248 263 - -
Bisa12g0105 299 SMART dnaj_3 108 165 IPR001623 -
Bisa12g0105 299 MobiDBLite consensus disorder prediction 248 283 - -
Bisa12g0105 299 Coils Coil 276 299 - -
Bisa12g0105 299 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 68 254 - -
Bisa12g0105 299 SUPERFAMILY Chaperone J-domain 81 169 IPR036869 -
Bisa12g0105 299 CDD DnaJ 110 162 IPR001623 -
Bisa12g0105 299 PRINTS DnaJ domain signature 111 129 IPR001623 -
Bisa12g0105 299 PRINTS DnaJ domain signature 145 165 IPR001623 -
Bisa12g0105 299 PRINTS DnaJ domain signature 129 144 IPR001623 -
Bisa12g0105 299 MobiDBLite consensus disorder prediction 165 189 - -
Bisa12g0105 299 MobiDBLite consensus disorder prediction 264 283 - -
Bisa12g0105 299 FunFam Chaperone DnaJ-domain superfamily protein 106 217 - -
Bisa12g0105 299 Pfam DnaJ domain 110 170 IPR001623 -
Bisa12g0105 299 ProSiteProfiles dnaJ domain profile. 109 173 IPR001623 -
Bisa12g0105 299 Gene3D DnaJ domain 107 217 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0105 Bisa-ChrBisa12 1468139 1470869 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0105 101 171 C2H2 Transcription Factor Family AT1G74250 39.241 1.29e-07 50.8