Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0103 ATGGGGGAGGAGGTGAGGATGAGCGACTACGAAGGTGGTGCCGCCGACTATGAGCGTGTTTTCGAGTGGGAGATGGGTCTTCCAAGCGCCGATGATCTTACTCCTCTGTCTCACTCTTTGATCCCACCGGAGCTCGCTTCCGCCTTCAGCATCCCGCTGGAGCCCGGTCGGACACTTATCGACGTCAATCGCGCCTCTCATAATACTATATCCAGTCTTCGCGGCGGGAACTCTCAGGTCTTCTCTTCCAACATTTTCAAGTCCTTCAACGATGACCGGAGTCGGGACCCGATTGTGGTGGAAGCAGATGAAGAATTGATTGATCGAGATGGATCAGGGTCCGATTCTAGGAAACTCAGGAAGATCGATTGCACAGAAGAAGCTGATTCGGCTTTGCGTACAGAGAATTCGACGGAGGATCCTTCGGCGAGGACCTTGAAGCGGCCTCGGCTGGTATGGACTCCGCAGTTACACAAGCGTTTTGTGGATGTGGTGGCTCATCTAGGAATCAAGAACGCGGTGCCCAAGACAATTATGCAATTGATGAATGTCGAGGGATTGACCCGTGAAAATGTGGCGAGCCATCTGCAGAAGTACCGGCTTTACCTGAAGCGGATGCAGGGGCTATCCAACGAGGGTCCTTCGTCGTCGGACCAGCTATTCGCATCCACACCTGTGCCTCAGAGTTTACATGAGTCTGGTGGGAGTGGGCATTCGCATGGAAACGGGCACCGGCCGGTTTCGATTCCGATGCCATATCCTCCGCCTATAATGTCGATGCCGGTTCTCGGGATGCCTCACGCCCATGGTCACATGGGAATGCCGGTACCTAATCCTGGCTTCGACTCCCATGCTTATAACATGGTGCAGCAAAGGGATTGGTCTGCGAATAAGTATGCTTCAGTTGTATCATACCCTCATGTTGCCCCTAATGATAAATAA 942 0.5297 MGEEVRMSDYEGGAADYERVFEWEMGLPSADDLTPLSHSLIPPELASAFSIPLEPGRTLIDVNRASHNTISSLRGGNSQVFSSNIFKSFNDDRSRDPIVVEADEELIDRDGSGSDSRKLRKIDCTEEADSALRTENSTEDPSARTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNEGPSSSDQLFASTPVPQSLHESGGSGHSHGNGHRPVSIPMPYPPPIMSMPVLGMPHAHGHMGMPVPNPGFDSHAYNMVQQRDWSANKYASVVSYPHVAPNDK 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0103 313 Gene3D - 145 207 - -
Bisa12g0103 313 MobiDBLite consensus disorder prediction 209 248 - -
Bisa12g0103 313 SUPERFAMILY Homeodomain-like 145 205 IPR009057 -
Bisa12g0103 313 NCBIfam myb-like DNA-binding domain, SHAQKYF class 149 201 IPR006447 GO:0003677
Bisa12g0103 313 MobiDBLite consensus disorder prediction 209 236 - -
Bisa12g0103 313 Pfam Myb-like DNA-binding domain 152 200 IPR001005 -
Bisa12g0103 313 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 7 285 IPR044841 GO:0003700|GO:0006355
Bisa12g0103 313 FunFam Two-component response regulator 144 207 - -
Bisa12g0103 313 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 153 204 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0103 Bisa-ChrBisa12 1462522 1463463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0103 1 274 G2-like Transcription Factor Family AT3G46640 59.649 4.17e-89 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bisa12g0103 Myb_DNA-binding 1.2e-08 CL0123