Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0087 ATGGGAGCAGGTTGTTCTAAGTTCTCTCTATGCTGCTGGTGGCCCTCTAATATCAAGCCAAATTCTCAAGGCTTGTCTGATGATGATGATGGGAACAAGAATGAGAAAGATTGTTGTTCTGGATTCACTGAGTACAGCTTTGATGAACTAAAATTTGCTACTTCAGGATTCTCACCTGATAACATTGTATCAGAGCACGGTGAGAAAGCTCCTAATGTTGTATATAAAGGAAAGCTTGAAGCTGATACGTGGATTGCTGTGAAGCGCTTCAACAAATCAGCTTGGCCTGATTCTCGACAATTCCTAGAAGAAGCACGAGTGGTGGGGCAGCTGCGGAATGAGAGATTAGCTAATTTAATTGGGTGTTGCTGCGAAGGAGAAGAGAGATTACTTGTTGCAGAATTTATGCCCAATGAAACTCTCTCGAAGCATCTTTTTCATTGGGAGACCCAGCCTATGAAATGGGCAATGAGGCTGAGAGTGGCCTTGTATTTGGCACAAGCTTTGGAGTACTGCAGCAACAGAGGAAGGGCATTGTACCATGATCTTAATGCTTATAGGGTTTTGTTTGATCAGGATGGCAACCCCAGACTCTCCTGTTTTGGACTCATGAAGAACAGCAGAGATGGCAGGAGCTACAGTACAAATTTAGCTTTCACCCCTCCGGAGTACTTGAGGACAGGAAGAATCACCCCAGAAAGTGTGGTTTACAGTTTCGGCACTCTTTTGCTTGATCTTCTCAGTGGCAAGCATATCCCACCAAGTCATGCACTCGACCTTATCAGAGGGAAAAAATTTCTCATGCTGATGGATTCTTGTTTGGAAGGTCATTGTTCAAGTGATGATGGAACTGAATTAGTGAGATTAGCTTCACGTTGTCTTCAGTATGAACCTCGTGAGAGGCCGAGTGCCAAGTCACTAGTGACTGCTCTAATTCCTCTTCAGAAAGAAACTTCAGTACCTTCAAATGTTTTAATGGGCATAGCAGATGTAAGTGCGCCGTCAAAAGAAACAGTTTCATTGACACCATTTGGTGAAGCTTGTTCTAACAGAGATCTCACTGCAATATTTGAAATTCTGGAAAAGGTGGGGTACAAGGATGATGATGATGTTGCGAATGAGCTATCGTTCCAAATGTGGACAAATCAAATTCAAGAAACACTAAATGCCAAGAAGCGTGGAGACGCTGCTTTCCGAGCTAGAGACTTTACTAAAGCCATCAACTGCTATACCCAATTCATTGAAGGTGGGACGATGATATCACCAACAGTGTACGCGAGACGGAGCTTATGTTACCTGATGAAGGAGATGCCTCAAGAAGCACTTGGGGATGCCATGCAAGCTCAATCGGTATATCCCACTTGGCACACTGCTTTTTATCTTCAAGCTGCTGCACTCTTCACCCTTGGAATGGACGATGATGCACACACAAGTCTCATGGATGGCACAACACTCGAAACTAGAAAGCATGTAATTTGA 1479 0.4381 MGAGCSKFSLCCWWPSNIKPNSQGLSDDDDGNKNEKDCCSGFTEYSFDELKFATSGFSPDNIVSEHGEKAPNVVYKGKLEADTWIAVKRFNKSAWPDSRQFLEEARVVGQLRNERLANLIGCCCEGEERLLVAEFMPNETLSKHLFHWETQPMKWAMRLRVALYLAQALEYCSNRGRALYHDLNAYRVLFDQDGNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRITPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKKFLMLMDSCLEGHCSSDDGTELVRLASRCLQYEPRERPSAKSLVTALIPLQKETSVPSNVLMGIADVSAPSKETVSLTPFGEACSNRDLTAIFEILEKVGYKDDDDVANELSFQMWTNQIQETLNAKKRGDAAFRARDFTKAINCYTQFIEGGTMISPTVYARRSLCYLMKEMPQEALGDAMQAQSVYPTWHTAFYLQAAALFTLGMDDDAHTSLMDGTTLETRKHVI 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0087 492 FunFam probable serine/threonine-protein kinase At5g41260 137 328 - -
Bisa12g0087 492 ProSiteProfiles Protein kinase domain profile. 60 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0087 492 SUPERFAMILY TPR-like 388 488 IPR011990 GO:0005515
Bisa12g0087 492 Gene3D Transferase(Phosphotransferase) domain 1 137 329 - -
Bisa12g0087 492 Pfam Protein tyrosine and serine/threonine kinase 73 311 IPR001245 GO:0004672|GO:0006468
Bisa12g0087 492 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 11 489 IPR045845 GO:0004672|GO:0009742
Bisa12g0087 492 FunFam probable serine/threonine-protein kinase At4g35230 385 492 - -
Bisa12g0087 492 FunFam probable serine/threonine-protein kinase At4g35230 32 135 - -
Bisa12g0087 492 SUPERFAMILY Protein kinase-like (PK-like) 38 316 IPR011009 -
Bisa12g0087 492 Gene3D Phosphorylase Kinase; domain 1 31 135 - -
Bisa12g0087 492 Gene3D Tetratricopeptide repeat domain 385 492 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0087 Bisa-ChrBisa12 1250923 1254620 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0087 21 311 Glycoside Hydrolase AT3G07070 32.911 3.94e-41 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Bisa12g0087 PK_Tyr_Ser-Thr 4e-28 CL0016