Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0084 ATGAGGAAGCCTGAGATATCTGGAAACAAGTACAAGGGCAACCAGCAGCTTAGAAAGGGGTTATGGTCACCAGAAGAAGATGACAAGCTCATAAGGTACATGCTCAACAATGGACGAGGTTGTTGGAGTGACGTGGCAAGAAATGCTGGCTTGCAAAGGTGTGGCAAAAGTTGTCGGCTTCGATGGATCAATTACTTGAGGCCTGATCTTAAACGAGGTGCTTTCTCTCCCCAAGAACAGCACCTCATCATCCATCTGCATTCCCTTCTTGGCAACAGATGGTCTCAAATAGCTGCGCACTTGCCCGGACGAACAGACAATGAAATCAAGAACTTTTGGAACAGCAGTATGAAAAGAAGACTCAAGAACTCATTCACAACCTCACCCAATACTAGTGATGAGTCTTCATGCGAGGCTACTAAAGACCTCTATGTGGGAGGGTTTATTTCTGCACAAGATCAACTCAGCTTTATGCCTATGTTCAATGATTCATCTCCATCCACAATTGAAAGCTTGACCTTGCTGGAGCATGGACTGAGCATGCAATCTGATGAGGGCGGATTCTTCAATGGGACAGGGCCATTATGCTTCACACAAAGTGGAGTTGTTGGAAGTAGTGATGTTGGGACACAAGAGGAGGTGTTTGTCCCTTCTCTACAGAGTGTTGAGAATACTTACTGTGATAACATAAACAGTATCGTTGATAACTGTAGTAGCCACAATTACAGAAATGAGGTGGAGAATTTATTTCAACAAGAGTTGGCTATGAGAGACCGGGGGTTGCAGGAATTGATGCAAGATCTTTCGTTTTTCCCCTTTCTTGATTTTTCTAGCTGA 837 0.4421 MRKPEISGNKYKGNQQLRKGLWSPEEDDKLIRYMLNNGRGCWSDVARNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEQHLIIHLHSLLGNRWSQIAAHLPGRTDNEIKNFWNSSMKRRLKNSFTTSPNTSDESSCEATKDLYVGGFISAQDQLSFMPMFNDSSPSTIESLTLLEHGLSMQSDEGGFFNGTGPLCFTQSGVVGSSDVGTQEEVFVPSLQSVENTYCDNINSIVDNCSSHNYRNEVENLFQQELAMRDRGLQELMQDLSFFPFLDFSS 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0084 278 CDD SANT 22 66 IPR001005 -
Bisa12g0084 278 SMART sant 18 68 IPR001005 -
Bisa12g0084 278 SMART sant 71 119 IPR001005 -
Bisa12g0084 278 SUPERFAMILY Homeodomain-like 17 113 IPR009057 -
Bisa12g0084 278 ProSiteProfiles Myb-like domain profile. 67 117 IPR001005 -
Bisa12g0084 278 PANTHER MYB DOMAIN PROTEIN 55 13 141 - -
Bisa12g0084 278 Pfam Myb-like DNA-binding domain 19 66 IPR001005 -
Bisa12g0084 278 Pfam Myb-like DNA-binding domain 72 114 IPR001005 -
Bisa12g0084 278 FunFam MYB transcription factor 16 72 - -
Bisa12g0084 278 ProSiteProfiles Myb-like domain profile. 14 66 IPR001005 -
Bisa12g0084 278 FunFam Myb transcription factor 74 121 - -
Bisa12g0084 278 CDD SANT 74 114 IPR001005 -
Bisa12g0084 278 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 66 IPR017930 -
Bisa12g0084 278 Gene3D - 73 143 - -
Bisa12g0084 278 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 121 IPR017930 -
Bisa12g0084 278 Gene3D - 16 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0084 Bisa-ChrBisa12 1239701 1241122 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0084 1 249 MYB Transcription Factor Family AT5G12870 47.547 3.99e-67 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa12g0084 Myb_DNA-binding 9.3e-13 CL0123