Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0073 ATGATCTCACGACCAACCTCGCTTTTTCCTCCCCAAGAATCTGGCAATGGAATCAACGAAAGTGAGAGTGCGTTTGATGTGATTTTTAGCGATCACTTGTCTGACAAAGGATCTAAGATGAATTGGAACCCCCAAACGGAGGCCCGCTACAATAACATTAGCTATCCCTATAGTACAGCCGGAAGCTTTATTGAATATTTTGAAGGTCTTACCTATGAACATGTCAATTACATTTTTAATGGTGCTTCACATGTTCAGGAGAGTTTGTACCCATCAGCTACTAGTTTCTACAAATCTGGACTATCTGAACCTGAGAGGACTTCATACTATTGTGATAGTCATGGTTATGAGGTGAATCATCATGAACCACAGTTTGATGAGTACAGAAGTCCATCAGAGAACTTGTCAACAATCAATGAACAGACGGCCACTGCAAGTACAGAAAGGGGAGAAGGTTCAAGAAGACACCATAATCCCCACAATTACCAGGTCGTTTTTCAAGACAATATTGATCCAGACCACATGACCTATGAGGAATTAGTTGAGTTGGGTGAGGCTGTTGGAACTCAAAACCGTGGTCTCTCCCAAGAACAGATCTCTTTGCTTCCAGTTTCAAAATACAAATGTGGATGTGTGATTTGCCAGATGGAATATAAAAGAGGGGACAAGCGGATCACTTTACCATGCAAGCATGTCTATCATGCTAATTGTGGGAACAGATGGCTTAGCATCAACAAGGCTTGTCCTATTTGTTACACAGAAGTCTTTGCTAACACGTCAAAACACAAATGA 792 0.4141 MISRPTSLFPPQESGNGINESESAFDVIFSDHLSDKGSKMNWNPQTEARYNNISYPYSTAGSFIEYFEGLTYEHVNYIFNGASHVQESLYPSATSFYKSGLSEPERTSYYCDSHGYEVNHHEPQFDEYRSPSENLSTINEQTATASTERGEGSRRHHNPHNYQVVFQDNIDPDHMTYEELVELGEAVGTQNRGLSQEQISLLPVSKYKCGCVICQMEYKRGDKRITLPCKHVYHANCGNRWLSINKACPICYTEVFANTSKHK 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0073 263 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 183 257 IPR013083 -
Bisa12g0073 263 FunFam E3 ubiquitin ligase BIG BROTHER 184 256 - -
Bisa12g0073 263 Pfam Ring finger domain 211 251 IPR001841 -
Bisa12g0073 263 MobiDBLite consensus disorder prediction 1 20 - -
Bisa12g0073 263 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 44 257 IPR033276 GO:0004842|GO:0016567|GO:0046621
Bisa12g0073 263 SMART ring_2 211 251 IPR001841 -
Bisa12g0073 263 SUPERFAMILY RING/U-box 210 258 - -
Bisa12g0073 263 ProSiteProfiles Zinc finger RING-type profile. 211 251 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0073 Bisa-ChrBisa12 1143485 1147164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0073 44 262 C3H Transcription Factor Family AT3G63530 40.816 7.39e-57 181