Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0072 ATGAAGTCTGGGTCTCAGAATGCAATATCAGAAGCTAATGGAATGCATGATCTTAAGACACCATTGTTGCAGACTTCACAAGATATCACAGTCAGGGAAGTCAAGTTTACAATAAAAGATATCAGTTGTGCGTCCTGTGTAAATTCAGTAGAATCTGCAGTTAGAAACCTAAATGGGGTCAATAGTGTTATGGTGTCAGCACTTGATGGCAAAGCTTCAATCAAATATGTGCCAGAGGTCATCAGTGCTAACAAGATAAAAGAGATCATAGAAGAAGCAGGTTTTAAAGTTCATGAGCTTTCCGAGCAAGACATATCAGTCTGCCGGGTCAAGATTAAAGGAATGGCATGCACAAGCTGCTCTGAGTCCGTTGAGCGCACCCTTCAGATGGTTGATGGAGTGAAAAAGGCAGTAGTAGGCCTAGCTTTAGAAGAAGCAAAAGTGCATTTTGATCCTAATCTCACTGATGCTAACAAGATAATTGAAGCAATAGAAGATGCTGGCTTTGGAGCAGATCTCATTGGCTCTGGGACTGGTGTGAACAAAGTGCATCTAAGACTTGAAGGAGTTGACTCTCCATCTGATGTAAATGTTATAATGTCATCTCTTGAGTTAGCTGAAGGTGTAAATCATGTTGAAATGGACTTGACAGGACACAAAGTTATAGTTAGCTATGATCCATATGTTACTGGTCCAAGATCTCTTATACATTGCATTCAAGCAGCTGGCACTGGCCACTGCGAGTATCATGCAACTTTGTGCACTCCTTCAAGACAAAGAGAAACAGGGAACATGTATGAAGTTCGTATGTATAGAGACCAATTTTTGTTTAGCTGCTTATTTTCTGTTCCCGTGTTCTTATTTGCCATGGTACTCCCTATGCTTCCTCCATATGGCAACTGGTTAAACTATAAGATCCACAATATGCTAACTCTTGGAATGTTTCTGAGATGGATCCTAAGCACTCCCGTTCAATTCATAGTTGGGAAAAAGGTACTACATGAGTTCTATGTTGGATCATATCATGCACTAAGGCGAAGATCTGCTAACATGGATGTGCTGGTTGCACTAGGCACCAATGCTGCATATTTTTACTCCATTTATATTTTAATAAAATCTCTCACTTCAGTCCGATTCCAGGGACAAGATTTCTTTGAGACCAGTTCAATGTTGATATCCTTTATTCTCTTAGGAAAATATTTGGAGGTTGTGGCTAAAGGAAAAACATCAGATGCTTTAGCAAAGCTGACACAACTTGTTCCTGATAAAGCTTATTTGTTAGACCTGGATGTTGATGGAAATGTCATATCTGAGGCAGAAATTGACACTCAACTTATACAGCGGAATGACATAATTAAGATTGTTCCTGGGGCCAAAATTCCTGTTGATGGTGTTGTTATAAAAGGGCAAAGCTATGTAAATGAAAGTATGATAACAGGGGAGGCAAGACCTATTGATAAAAGTCCAGGAGACAAGGTTATTGGTGGGACCATGAATGAGAATGGCTGCTTGCTGGTTAAGGCTACACATGTTGGATCAGAGACTGCACTTTCTCAAATTGTTCAGATTGTAGAAGCTGCTCAACTTGCTAGAGCACCGGTTCAAAAACTTGCTGACCATATTTCAAGATTTTTTGTCCCAATAGTTGTCATTGCAGCATTTATAACCTGGCTGGGATGGTTTATCCCTGGTGAAGCCGGTATTTACCCTAAGCATTGGATACCAAAAGCTATGGATGCATTTGAGCTTGCCTTGCAGTTTGCTATCTCAGTGCTAGTGGTTGCCTGCCCCTGTGCTCTGGGTCTAGCAACACCAACGGCAGTCATGGTTGCTTCTGGTATGGGTGCTTCTCAAGGTGTGCTCATCAAAGGGGGAGATGCACTGGAAAAGGCACACAAGGTAAAAATTGTTGTGTTTGATAAGACAGGGACTCTTACAGTTGGAAAGCCAGAGGTAGTTAGTGCAGTGCTGTTTTCTGAATTTTCGATGGAGGAGTTATGTGACTTGACCATTGCTGTAGAGGGTAACAGTGAACACCCAATAGCAAAAGCTGTTGTAGTTCATGCAAAGAGGCTGCGCCATAAGTTTGGGTCTTGCCCTGAGCAAGTCATAGATGTGAACGACTTTGAAGTGCACCTGGGAGCTGGGGTAAGTGGAAAAGTTGGTGGGAGAACAGTTTTTGTTGGGAACAAAAGACTCATGCATTCTTGTAATGTCCCAATATGTCCAGAGGTTGAGAGGTACATTTCTGAAAATGAAGTTCTGACTAGAACTTGTATACTAGTTTCAATTGACGGAAGGATTGCTGGAGCTTTCTCTGTAACTGATCCTGTAAAGCCTGAGGCTAAGCGTGTAATATCTTTTCTCCACTCCATGGGCATCTTAAGCATCATGGTGACTGGTGATAACTGCGCGACTGCAACTGCTATTGCAAACGAAGTTGGTATTGACAAGGTCTTCGCTGAGACAGATCCAATGGGAAAAGCTGATAAGGTTAAAGAATTACAGAACAAAGGGATGATCGTAGCAATGGTGGGCGATGGAATTAATGACTCACCAGCATTAGTTGCTGCTGACGTTGGCATGGCAATTGGTGCTGGAACTGACGTAGCCATAGAAGCGGCTGATATAGTTCTTGTCAAAAGTAGCTTGGAAGATGTAGTTACAGCCATAGATCTCTCCAGAAAGACCATGTCTCGTATCCGTCTCAACTACATTTGGGCCCTAGGTTACAACATTCTTGGCATGCCTATTGCTGCTGGCATCTTGTACCCCTTCACTGGAATCAGGTTGCCCCCCTGGCTTGCTGGTGCTTGCATGGCTGCTTCATCTCTTAGTGTTGTTTCTTCATCTCTTTTGTTGCAGCTCTACAAGAAACCTTTGCACGTAAAACCTACTTGA 2901 0.4236 MKSGSQNAISEANGMHDLKTPLLQTSQDITVREVKFTIKDISCASCVNSVESAVRNLNGVNSVMVSALDGKASIKYVPEVISANKIKEIIEEAGFKVHELSEQDISVCRVKIKGMACTSCSESVERTLQMVDGVKKAVVGLALEEAKVHFDPNLTDANKIIEAIEDAGFGADLIGSGTGVNKVHLRLEGVDSPSDVNVIMSSLELAEGVNHVEMDLTGHKVIVSYDPYVTGPRSLIHCIQAAGTGHCEYHATLCTPSRQRETGNMYEVRMYRDQFLFSCLFSVPVFLFAMVLPMLPPYGNWLNYKIHNMLTLGMFLRWILSTPVQFIVGKKVLHEFYVGSYHALRRRSANMDVLVALGTNAAYFYSIYILIKSLTSVRFQGQDFFETSSMLISFILLGKYLEVVAKGKTSDALAKLTQLVPDKAYLLDLDVDGNVISEAEIDTQLIQRNDIIKIVPGAKIPVDGVVIKGQSYVNESMITGEARPIDKSPGDKVIGGTMNENGCLLVKATHVGSETALSQIVQIVEAAQLARAPVQKLADHISRFFVPIVVIAAFITWLGWFIPGEAGIYPKHWIPKAMDAFELALQFAISVLVVACPCALGLATPTAVMVASGMGASQGVLIKGGDALEKAHKVKIVVFDKTGTLTVGKPEVVSAVLFSEFSMEELCDLTIAVEGNSEHPIAKAVVVHAKRLRHKFGSCPEQVIDVNDFEVHLGAGVSGKVGGRTVFVGNKRLMHSCNVPICPEVERYISENEVLTRTCILVSIDGRIAGAFSVTDPVKPEAKRVISFLHSMGILSIMVTGDNCATATAIANEVGIDKVFAETDPMGKADKVKELQNKGMIVAMVGDGINDSPALVAADVGMAIGAGTDVAIEAADIVLVKSSLEDVVTAIDLSRKTMSRIRLNYIWALGYNILGMPIAAGILYPFTGIRLPPWLAGACMAASSLSVVSSSLLLQLYKKPLHVKPT 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0072 966 Gene3D - 406 528 - -
Bisa12g0072 966 SUPERFAMILY HAD-like 636 951 IPR036412 -
Bisa12g0072 966 CDD P-type_ATPase_Cu-like 275 941 - -
Bisa12g0072 966 SUPERFAMILY Calcium ATPase, transduction domain A 439 524 IPR008250 -
Bisa12g0072 966 ProSitePatterns E1-E2 ATPases phosphorylation site. 640 646 IPR018303 -
Bisa12g0072 966 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 25 962 - -
Bisa12g0072 966 FunFam Probable copper-transporting ATPase HMA5 769 902 - -
Bisa12g0072 966 PRINTS Copper-transporting ATPase 1 signature 130 151 - -
Bisa12g0072 966 PRINTS Copper-transporting ATPase 1 signature 59 82 - -
Bisa12g0072 966 PRINTS Copper-transporting ATPase 1 signature 33 58 - -
Bisa12g0072 966 NCBIfam HAD-IC family P-type ATPase 391 922 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bisa12g0072 966 ProSiteProfiles Heavy-metal-associated domain profile. 106 172 IPR006121 GO:0046872
Bisa12g0072 966 Gene3D - 27 106 - -
Bisa12g0072 966 Pfam E1-E2 ATPase 437 616 - -
Bisa12g0072 966 SUPERFAMILY HMA, heavy metal-associated domain 27 100 IPR036163 GO:0046872
Bisa12g0072 966 FunFam Copper-transporting ATPase HMA5 105 176 - -
Bisa12g0072 966 ProSiteProfiles Heavy-metal-associated domain profile. 181 247 IPR006121 GO:0046872
Bisa12g0072 966 FunFam Copper-transporting ATPase 1, putative 406 528 - -
Bisa12g0072 966 SFLD Haloacid Dehalogenase 620 897 - -
Bisa12g0072 966 Pfam Heavy-metal-associated domain 36 96 IPR006121 GO:0046872
Bisa12g0072 966 Pfam Heavy-metal-associated domain 110 169 IPR006121 GO:0046872
Bisa12g0072 966 Gene3D - 629 895 IPR023214 -
Bisa12g0072 966 NCBIfam copper ion binding protein 34 97 IPR006122 GO:0005507
Bisa12g0072 966 NCBIfam copper ion binding protein 110 170 IPR006122 GO:0005507
Bisa12g0072 966 Pfam haloacid dehalogenase-like hydrolase 634 859 - -
Bisa12g0072 966 SUPERFAMILY HMA, heavy metal-associated domain 178 246 IPR036163 GO:0046872
Bisa12g0072 966 ProSitePatterns Heavy-metal-associated domain. 112 141 IPR017969 GO:0046872
Bisa12g0072 966 FunFam ATPase copper transporting beta 30 103 - -
Bisa12g0072 966 CDD HMA 110 171 IPR006121 GO:0046872
Bisa12g0072 966 Gene3D - 649 778 IPR023299 GO:0000166
Bisa12g0072 966 Gene3D - 180 255 - -
Bisa12g0072 966 Gene3D - 107 176 - -
Bisa12g0072 966 PRINTS P-type cation-transporting ATPase superfamily signature 638 652 - -
Bisa12g0072 966 PRINTS P-type cation-transporting ATPase superfamily signature 770 781 - -
Bisa12g0072 966 PRINTS P-type cation-transporting ATPase superfamily signature 845 864 - -
Bisa12g0072 966 PRINTS P-type cation-transporting ATPase superfamily signature 474 488 - -
Bisa12g0072 966 PRINTS P-type cation-transporting ATPase superfamily signature 868 880 - -
Bisa12g0072 966 PRINTS P-type cation-transporting ATPase superfamily signature 792 802 - -
Bisa12g0072 966 ProSiteProfiles Heavy-metal-associated domain profile. 32 98 IPR006121 GO:0046872
Bisa12g0072 966 SFLD p-type atpase 620 897 IPR044492 -
Bisa12g0072 966 SUPERFAMILY HMA, heavy metal-associated domain 103 175 IPR036163 GO:0046872
Bisa12g0072 966 CDD HMA 35 98 IPR006121 GO:0046872
Bisa12g0072 966 SUPERFAMILY Calcium ATPase, transmembrane domain M 386 632 IPR023298 -
Bisa12g0072 966 CDD HMA 185 252 IPR006121 GO:0046872
Bisa12g0072 966 NCBIfam heavy metal translocating P-type ATPase 351 954 IPR027256 GO:0006812|GO:0016020|GO:0019829
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0072 Bisa-ChrBisa12 1136816 1141495 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0072 36 960 Primary Pumps ATPases AT1G63440 57.235 0.0 1058