Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0070 ATGACAGATCCCTCCCTTTTCTCCTCTAATTATTCCTCATCTTCTTATTATTCCATTGATTTCCCTTCTAGTTTTCATGACTTCAAATCTTTCACTCCGTACCTACCCTTCTCTTCTCCTCCAAGACAAGCCCTTCCACTCCTTCCTGCAAGACATGAAGATATGGAAGTAGACAACAGCAATAACAATAAGGAGAAAGAAGGAAGCATGTCGTCTAGCTCTATGGATGATGATGATAACACTGTGACGGTGGGTTTACAGTTACAGTTACACCTAGGGCTTCCAACCACAAGTAGTACTACTACTTTATCACCTGATTTACCTAATAATTCAATTTCTTCAAACATATACTCCACAGAGGTTTCAGACAAAGAAGATGATCAAGTGACTCTGGCAAGTTCTGGATATCTAGATCTCTCGAATAGGATTAATAGGGGACAGTATTGGATCCCTACACCTGCTCAAATTCTGATTGGTCCAACTCAGTTCTCCTGCCCTCTTTGTTTCAAGACCTTCAACAGATACAACAACATGCAGATGCACATGTGGGGGCATGGATCTGAATATAGGAAGGGACCAGAGTCTCTAAGAGGAACACAGCCCACAGCAATGCTGAAGCTTCCATGCTATTGCTGTGCACCTGGATGCAGCAACAATATTGAGCATCCAAGAGCCAAGCCTCTCAAAGACTTCAGAACCCTTCAGACCCATTACAAGAGGAAGCATGGAATCAAGCCTTTCATGTGCAGAAAGTGTTGCAAAGCTTTTGCTGTGAGAGGTGATTGGAGGACTCACGAGAAGAACTGTGGCAAGCTCTGGTATTGTTCGTGTGGCTCTGATTTCAAGCATAAGAGGTCGCTTAAAGATCACATCAAGGCTTTTGGACATTCCCATACGCCTTCTGGTATTGATTGCTTTGATCAAGATCTTCAAGAAGCTGCTACTGCGTCTGAAATTGGCCTACAACGAAATCAGTCCTATTCCTTTCACTCCTAG 996 0.4317 MTDPSLFSSNYSSSSYYSIDFPSSFHDFKSFTPYLPFSSPPRQALPLLPARHEDMEVDNSNNNKEKEGSMSSSSMDDDDNTVTVGLQLQLHLGLPTTSSTTTLSPDLPNNSISSNIYSTEVSDKEDDQVTLASSGYLDLSNRINRGQYWIPTPAQILIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSEYRKGPESLRGTQPTAMLKLPCYCCAPGCSNNIEHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCCKAFAVRGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHIKAFGHSHTPSGIDCFDQDLQEAATASEIGLQRNQSYSFHS 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0070 331 Gene3D Classic Zinc Finger 224 303 - -
Bisa12g0070 331 SUPERFAMILY beta-beta-alpha zinc fingers 229 267 IPR036236 -
Bisa12g0070 331 ProSitePatterns Zinc finger C2H2 type domain signature. 165 185 IPR013087 -
Bisa12g0070 331 SUPERFAMILY beta-beta-alpha zinc fingers 159 186 IPR036236 -
Bisa12g0070 331 Gene3D Classic Zinc Finger 162 185 - -
Bisa12g0070 331 FunFam Zinc finger protein WIP2 216 298 - -
Bisa12g0070 331 MobiDBLite consensus disorder prediction 64 80 - -
Bisa12g0070 331 ProSiteProfiles Zinc finger C2H2 type domain profile. 163 190 IPR013087 -
Bisa12g0070 331 MobiDBLite consensus disorder prediction 50 80 - -
Bisa12g0070 331 PANTHER ZINC FINGER PROTEIN WIP2 26 322 IPR043584 GO:0003700|GO:0010468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0070 Bisa-ChrBisa12 1123976 1125973 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0070 86 319 C2H2 Transcription Factor Family AT3G57670 65.217 1.40e-119 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa12g0070 None None None